RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 ASPHD1Q5U4P2 390 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 SLC35E3Q7Z769 313 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 LRRTM1Q86UE6 522 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 THNSL2Q86YJ6 484 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 OR11H1Q8NG94 326 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 OR52N4Q8NGI2 321 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 C4orf3Q8WVX3 66 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 BORCS8Q96FH0 119 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 OR51E2Q9H255 320 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 LY6LH3BQJ8 138 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 ARL6IP5O75915 188 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 LY6G6CO95867 125 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 IFNA6P05013 189 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 FAM106CPP0CH98 169 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 SRMP19623 302 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 GADD45AP24522 165 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 BDKRB2P30411 391 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 HAAOP46952 286 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 ATP1B3P54709 279 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 MTCP1P56278 107 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 ZP1P60852 638 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 PPP3R1P63098 170 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 IL24Q13007 206 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 FOXE3Q13461 319 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 KISS1Q15726 138 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 HSD17B12Q53GQ0 312 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 ANGPTL5Q86XS5 388 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 FOXRED2Q8IWF2 684 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 CDH26Q8IXH8 852 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 SPACA5Q96QH8 159 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 NEK6Q9HC98 313 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 HES4Q9HCC6 221 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 TXNL4BQ9NX01 149 aaKnown RBP13.68□□□□□ -0.22
SSBP4-207ENST00000600244 CKLFQ9UBR5 152 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 OR14J1Q9UGF5 321 aa13.68□□□□□ -0.22
SSBP4-207ENST00000600244 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 FGF16O43320 207 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 PDZK1IP1Q13113 114 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 TPTE2P1Q5T6R2 138 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 BAIAP2L2Q6UXY1 529 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 GDPD3Q7L5L3 318 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 RTN4RL2Q86UN3 420 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 ZNF596Q8TC21 504 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 LINC00312Q9Y6C7 94 aa13.67□□□□□ -0.22
SSBP4-207ENST00000600244 TRAV1-2A0A0B4J238 106 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 hADV38S2A0JD32 116 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 ELANEP08246 267 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 ERVK11-1P61568 191 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 SRSF7Q16629 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
SSBP4-207ENST00000600244 HAGHQ16775 308 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 DDI2Q5TDH0 399 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 ASCL4Q6XD76 172 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 NKAIN3Q8N8D7 197 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 ASCC1Q8N9N2 400 aaKnown RBP13.66□□□□□ -0.22
SSBP4-207ENST00000600244 GFI1Q99684 422 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 MTCH1Q9NZJ7 389 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 POLDIP2Q9Y2S7 368 aa13.66□□□□□ -0.22
SSBP4-207ENST00000600244 IGKV1-12A0A0C4DH73 117 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 IGKV1D-12P01611 117 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 MAS1P04201 325 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 OR8U8P0C7N1 319 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 CALRP27797 417 aaKnown RBP13.65□□□□□ -0.22
SSBP4-207ENST00000600244 C22orf42Q6IC83 251 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 SLC25A26Q70HW3 274 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 SAXO1Q8IYX7 474 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 OR8H2Q8N162 312 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 ST6GALNAC6Q969X2 333 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 RFT1Q96AA3 541 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 CPNE2Q96FN4 548 aaPredicted RBP13.65□□□□□ -0.22
SSBP4-207ENST00000600244 CENPOQ9BU64 300 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 FUNDC2Q9BWH2 189 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 SSR3Q9UNL2 185 aa13.65□□□□□ -0.22
SSBP4-207ENST00000600244 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 F8VVB4 439 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 F8VWA3 439 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 BUB1B-PAK6H3BSN5 160 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 AP4M1O00189 453 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 MAGEB3O15480 346 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 NXPH2O95156 264 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 OCMP0CE72 109 aaPredicted RBP13.64□□□□□ -0.23
SSBP4-207ENST00000600244 SNRPBP14678 240 aaKnown RBP13.64□□□□□ -0.23
SSBP4-207ENST00000600244 CNTFRP26992 372 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 ZNF93P35789 620 aaPredicted RBP13.64□□□□□ -0.23
SSBP4-207ENST00000600244 CEACAM3P40198 252 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 MNDAP41218 407 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
SSBP4-207ENST00000600244 POU3F4P49335 361 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 TIMM50Q3ZCQ8 353 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 C1orf100Q5SVJ3 147 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 CCDC144NLQ6NUI1 221 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 SLC16A12Q6ZSM3 486 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 PXT1Q8NFP0 134 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 OR1N2Q8NGR9 330 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 CHCHD6Q9BRQ6 235 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 UQCC2Q9BRT2 126 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 TNCP24821 2201 aa13.64□□□□□ -0.23
SSBP4-207ENST00000600244 AIREO43918 545 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 SAP30O75446 220 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 KDM4BO94953 1096 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms