RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 HBZP02008 142 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 PAX6P26367 422 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 HMGN3Q15651 99 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 FAM189A2Q15884 450 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 OR52W1Q6IF63 320 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 OR52M1Q8NGK5 317 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 DYNC2LI1Q8TCX1 351 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 LEAP2Q969E1 77 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 CLEC7AQ9BXN2 247 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 RIMS4Q9H426 269 aaPredicted RBP11.14□□□□□ -0.63
VRK3-219ENST00000600137 Q9N2K0 584 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 PSG11Q9UQ72 335 aa11.14□□□□□ -0.63
VRK3-219ENST00000600137 POM121CA8CG34 1229 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 H3BMQ9 156 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 LY6LH3BQJ8 138 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 IFNA2P01563 188 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 MELTFP08582 738 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 RORCP51449 518 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 DYNC1I2Q13409 638 aaKnown RBP11.13□□□□□ -0.63
VRK3-219ENST00000600137 C6orf183Q5T699 404 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 LDLRAD3Q86YD5 345 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 ZNF439Q8NDP4 499 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 ZNF596Q8TC21 504 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 ZNF418Q8TF45 676 aaPredicted RBP11.13□□□□□ -0.63
VRK3-219ENST00000600137 ISOC1Q96CN7 298 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 CMSS1Q9BQ75 279 aaKnown RBP11.13□□□□□ -0.63
VRK3-219ENST00000600137 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
VRK3-219ENST00000600137 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 J3QR06 171 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 TCF21O43680 179 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 SSX5O60225 188 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 IGHV3-7P01780 117 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 ARG1P05089 322 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
VRK3-219ENST00000600137 NFYBP25208 207 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 ZNF134P52741 427 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 SLC9A3R2Q15599 337 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 LTC4SQ16873 150 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 TRAT1Q6PIZ9 186 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 BEND2Q8NDZ0 799 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
VRK3-219ENST00000600137 TBL2Q9Y4P3 447 aaKnown RBP11.12□□□□□ -0.63
VRK3-219ENST00000600137 A0A075B6Q4 140 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 IGKV1D-8A0A087WSZ0 117 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 IGHV3-43A0A0B4J1X8 118 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 A6NJ64 397 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 SERPINE3A8MV23 424 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 SPINT2O43291 252 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 EIF4EP06730 217 aaKnown RBP11.11□□□□□ -0.63
VRK3-219ENST00000600137 FCGR3AP08637 254 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 GSTP1P09211 210 aaKnown RBP11.11□□□□□ -0.63
VRK3-219ENST00000600137 SCTP09683 121 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 IGHV3-43DP0DP04 118 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 IER3P46695 156 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 HTD2P86397 168 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 HLA-DRB5Q30154 266 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 KRTAP21-3Q3LHN1 58 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 MINOS1Q5TGZ0 78 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 SAMD12Q8N8I0 201 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 DTX3Q8N9I9 347 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 OR9G1Q8NH87 305 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 ACOT12Q8WYK0 555 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 COMMD3Q9UBI1 195 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 MINOS1-NBL1R4GNA1 71 aa11.11□□□□□ -0.63
VRK3-219ENST00000600137 TRAV18A0A075B6X5 111 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 A0A1W2PPE3 182 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 TMEM235A6NFC5 223 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 DNAJC9-AS1A6NH13 148 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 CLDN34H7C241 214 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
VRK3-219ENST00000600137 SLC31A2O15432 143 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 HOXA3O43365 443 aaPredicted RBP11.1□□□□□ -0.63
VRK3-219ENST00000600137 XRCC3O43542 346 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 SCGNO76038 276 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 IGHV4-59P01825 116 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 FBP1P09467 338 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 CD3GP09693 182 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 PTHLHP12272 177 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 ELK1P19419 428 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 UBA52P62987 128 aaKnown RBP11.1□□□□□ -0.63
VRK3-219ENST00000600137 GNMTQ14749 295 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 SRSF7Q16629 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
VRK3-219ENST00000600137 Q3ZCU0 254 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 MORN2Q502X0 79 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 CT45A1Q5HYN5 189 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 UBE2NLQ5JXB2 153 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms