RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 OR10A7Q8NGE5 316 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 OR1L1Q8NH94 360 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 YIPF6Q96EC8 236 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 KCTD7Q96MP8 289 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 LIN7BQ9HAP6 207 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 PLEKHJ1Q9NW61 149 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 DPM3Q9P2X0 92 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 RAB22AQ9UL26 194 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 PSG11Q9UQ72 335 aa12.28□□□□□ -0.44
LIG1-219ENST00000600055 NOTOA8MTQ0 251 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 VGLL3A8MV65 326 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 BUB1B-PAK6H3BSN5 160 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 J3QR06 171 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 SDCBPO00560 298 aaPredicted RBP12.27□□□□□ -0.45
LIG1-219ENST00000600055 CA11O75493 328 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 HBZP02008 142 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.45
LIG1-219ENST00000600055 TGFBR1P36897 503 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 PRRX1P54821 245 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 MXD1Q05195 221 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 FOXL1Q12952 345 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 AANATQ16613 207 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 TIMM50Q3ZCQ8 353 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 C6orf183Q5T699 404 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 GDPGP1Q6ZNW5 385 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 Q6ZPA2 131 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 TPRA1Q86W33 373 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 OR9G1Q8NH87 305 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 HDHD3Q9BSH5 251 aaPredicted RBP12.27□□□□□ -0.45
LIG1-219ENST00000600055 PECRQ9BY49 303 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 MMP28Q9H239 520 aa12.27□□□□□ -0.45
LIG1-219ENST00000600055 LEUTXA8MZ59 168 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 F2RL2O00254 374 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 SMIM18P0DKX4 95 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 RAG2P55895 527 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 LOXL3P58215 753 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 MOGAT2Q3SYC2 334 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 PLAC9Q5JTB6 97 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 TPTE2P1Q5T6R2 138 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 OLFML2AQ68BL7 652 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 CCBE1Q6UXH8 406 aaPredicted RBP12.26□□□□□ -0.45
LIG1-219ENST00000600055 ARHGAP5-AS1Q96IT6 56 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 ABCB10Q9NRK6 738 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 MBNL3Q9NUK0 354 aaKnown RBP12.26□□□□□ -0.45
LIG1-219ENST00000600055 GFOD1Q9NXC2 390 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 AK3Q9UIJ7 227 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 DAPK2Q9UIK4 370 aa12.26□□□□□ -0.45
LIG1-219ENST00000600055 SPINT2O43291 252 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 CHST1O43916 411 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 SNRPBP14678 240 aaKnown RBP12.25□□□□□ -0.45
LIG1-219ENST00000600055 RANBP1P43487 201 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 RPL5P46777 297 aaKnown RBP12.25□□□□□ -0.45
LIG1-219ENST00000600055 LSM3P62310 102 aaKnown RBP12.25□□□□□ -0.45
LIG1-219ENST00000600055 DIAPH2-AS1Q14236 149 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 DHRS7BQ6IAN0 325 aaPredicted RBP12.25□□□□□ -0.45
LIG1-219ENST00000600055 SFXN4Q6P4A7 337 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 Q6ZSV7 163 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 Q6ZTK2 550 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 TMEM219Q86XT9 240 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 OR56B1Q8NGI3 324 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 OR10V1Q8NGI7 309 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 OR52M1Q8NGK5 317 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 CHMP1AQ9HD42 196 aaPredicted RBP12.25□□□□□ -0.45
LIG1-219ENST00000600055 HSF4Q9ULV5 492 aa12.25□□□□□ -0.45
LIG1-219ENST00000600055 A6NDX4 124 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 SLC31A2O15432 143 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 AIREO43918 545 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 NDUFA7O95182 113 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 NAPSAO96009 420 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 RAB6AP20340 208 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 CD24P25063 80 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 RPL15P61313 204 aaKnown RBP12.24□□□□□ -0.45
LIG1-219ENST00000600055 GNMTQ14749 295 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 FBLN7Q53RD9 439 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 TRAT1Q6PIZ9 186 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 SLC16A12Q6ZSM3 486 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 C3orf56Q8N813 242 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 OR52L2PQ8NGH6 319 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 SETD6Q8TBK2 473 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 KCNIP1Q9NZI2 227 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 TCF19Q9Y242 345 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 KCNK7Q9Y2U2 307 aa12.24□□□□□ -0.45
LIG1-219ENST00000600055 RAB27BO00194 218 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 CEACAM3P40198 252 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 DYNLT3P51808 116 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 HMGN3Q15651 99 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 ZNF880Q6PDB4 577 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 GPR141Q7Z602 305 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 OR10X1Q8NGY0 326 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 OR4F5Q8NH21 305 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 RPEQ96AT9 228 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 CREB3L1Q96BA8 519 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
LIG1-219ENST00000600055 AMMECR1Q9Y4X0 333 aaPredicted RBP12.23□□□□□ -0.45
LIG1-219ENST00000600055 A0A075B6Q4 140 aa12.22□□□□□ -0.45
LIG1-219ENST00000600055 GNB3P16520 340 aa12.22□□□□□ -0.45
LIG1-219ENST00000600055 ZNF134P52741 427 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms