RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 TMEM104Q8NE00 496 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 OR4K15Q8NH41 348 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 SGCDQ92629 289 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 Q96M66 194 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 SLC25A33Q9BSK2 321 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 YTHDF1Q9BYJ9 559 aaKnown RBP11.37□□□□□ -0.59
LIG1-218ENST00000599322 MMP27Q9H306 513 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 CHMP1AQ9HD42 196 aaPredicted RBP11.37□□□□□ -0.59
LIG1-218ENST00000599322 ABRACLQ9P1F3 81 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 CSF1P09603 554 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 ARSBP15848 533 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 MYL9P24844 172 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 CALRP27797 417 aaKnown RBP11.36□□□□□ -0.59
LIG1-218ENST00000599322 MAP2K4P45985 399 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 GABARAPL2P60520 117 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 RPS25P62851 125 aaKnown RBP11.36□□□□□ -0.59
LIG1-218ENST00000599322 RAB11BQ15907 218 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 CCBE1Q6UXH8 406 aaPredicted RBP11.36□□□□□ -0.59
LIG1-218ENST00000599322 ZNF554Q86TJ5 538 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 THNSL2Q86YJ6 484 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 LEAP2Q969E1 77 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 OCSTAMPQ9BR26 566 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 GFOD1Q9NXC2 390 aa11.36□□□□□ -0.59
LIG1-218ENST00000599322 CCRL2O00421 344 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 SLC22A1O15245 554 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 SC5DO75845 299 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 RGS11O94810 467 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 OR2F2O95006 317 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 CD24P25063 80 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 BLVRBP30043 206 aaPredicted RBP11.35□□□□□ -0.59
LIG1-218ENST00000599322 RPS27AP62979 156 aaKnown RBP11.35□□□□□ -0.59
LIG1-218ENST00000599322 EMX1Q04741 257 aaPredicted RBP11.35□□□□□ -0.59
LIG1-218ENST00000599322 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
LIG1-218ENST00000599322 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 LYPD6Q86Y78 171 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 C8orf31Q8N9H6 132 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 RBM14Q96PK6 669 aaKnown RBP11.35□□□□□ -0.59
LIG1-218ENST00000599322 RIMS4Q9H426 269 aaPredicted RBP11.35□□□□□ -0.59
LIG1-218ENST00000599322 ZNF702PQ9H963 129 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 PLEKHJ1Q9NW61 149 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 ZNF581Q9P0T4 197 aa11.35□□□□□ -0.59
LIG1-218ENST00000599322 AK6Q9Y3D8 172 aaKnown RBP11.35□□□□□ -0.59
LIG1-218ENST00000599322 C12orf77C9JDV5 145 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 LY6LH3BQJ8 138 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 C15orf65H3BRN8 121 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 SLC17A2O00624 439 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 TXNL1O43396 289 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 FBXO24O75426 580 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 HBZP02008 142 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 VSIG8P0DPA2 414 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 TMEM11P17152 192 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 JUNBP17275 347 aaPredicted RBP11.34□□□□□ -0.59
LIG1-218ENST00000599322 MRPS15P82914 257 aaKnown RBP11.34□□□□□ -0.59
LIG1-218ENST00000599322 C9orf152Q5JTZ5 239 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 Q8N2B8 174 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 LINC00311Q8N616 119 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 OR56B4Q8NH76 319 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 FCGR1BQ92637 280 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 GALMQ96C23 342 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 TAF9BQ9HBM6 251 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 OR2S2Q9NQN1 319 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 V9GY05 133 aa11.34□□□□□ -0.59
LIG1-218ENST00000599322 IGHV3-43A0A0B4J1X8 118 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 A0A1W2PPE3 182 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 HSD17B6O14756 317 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 DENRO43583 198 aaKnown RBP11.33□□□□□ -0.6
LIG1-218ENST00000599322 IGHV3-43DP0DP04 118 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 KRTAP10-3P60369 221 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 BLCAPP62952 87 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 FABP5Q01469 135 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 P2RY14Q15391 338 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 STEAP3Q658P3 488 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 TMEM91Q6ZNR0 172 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 DRAM1Q8N682 238 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 C11orf44Q8N8P7 122 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 UBALD1Q8TB05 177 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 SETD6Q8TBK2 473 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 MGAT4AQ9UM21 535 aa11.33□□□□□ -0.6
LIG1-218ENST00000599322 TGP01266 2768 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 TMEM14DPA8MWL7 114 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 SNRNP70P08621 437 aaKnown RBP11.32□□□□□ -0.6
LIG1-218ENST00000599322 RCC1P18754 421 aaPredicted RBP11.32□□□□□ -0.6
LIG1-218ENST00000599322 PSMB9P28065 219 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 CHATP28329 748 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 GP2P55259 537 aaKnown RBP11.32□□□□□ -0.6
LIG1-218ENST00000599322 ZNF816Q0VGE8 651 aaPredicted RBP11.32□□□□□ -0.6
LIG1-218ENST00000599322 HABP2Q14520 560 aaPredicted RBP11.32□□□□□ -0.6
LIG1-218ENST00000599322 MOB1BQ7L9L4 216 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 TGIF2LXQ8IUE1 241 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 GAPTQ8N292 157 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 OR56B1Q8NGI3 324 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 OR10V1Q8NGI7 309 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms