RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 C6orf201Q7Z4U5 140 aa18.33■□□□□ 0.52
IRF3-220ENST00000598108 FAM3DQ96BQ1 224 aa18.33■□□□□ 0.52
IRF3-220ENST00000598108 NEDD4LQ96PU5 975 aa18.33■□□□□ 0.52
IRF3-220ENST00000598108 F2RL2O00254 374 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 SOCS1O15524 211 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 GALP22466 123 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 BLVRBP30043 206 aaPredicted RBP18.32■□□□□ 0.52
IRF3-220ENST00000598108 PSMD7P51665 324 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 FBLN7Q53RD9 439 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 HES5Q5TA89 166 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 SLC16A12Q6ZSM3 486 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 OR2W3Q7Z3T1 314 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 OR1L1Q8NH94 360 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 MRPL30Q8TCC3 161 aaKnown RBP18.32■□□□□ 0.52
IRF3-220ENST00000598108 CREB3L1Q96BA8 519 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 RAB18Q9NP72 206 aa18.32■□□□□ 0.52
IRF3-220ENST00000598108 FBN3Q75N90 2809 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 IGHV3-43A0A0B4J1X8 118 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 SDCBPO00560 298 aaPredicted RBP18.31■□□□□ 0.52
IRF3-220ENST00000598108 LDLRAD4O15165 306 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 IGHV3-43DP0DP04 118 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 DIAPH2-AS1Q14236 149 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 LIAT1Q6ZQX7 453 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 NR2C2APQ86WQ0 139 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 FAM89BQ8N5H3 189 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 OR52M1Q8NGK5 317 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 MBNL3Q9NUK0 354 aaKnown RBP18.31■□□□□ 0.52
IRF3-220ENST00000598108 GFOD1Q9NXC2 390 aa18.31■□□□□ 0.52
IRF3-220ENST00000598108 PDCD5O14737 125 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 HBZP02008 142 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 MYL9P24844 172 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 CEACAM3P40198 252 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 NEDD8Q15843 81 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 PRR18Q8N4B5 295 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 TAF9BQ9HBM6 251 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 TXNL4BQ9NX01 149 aaKnown RBP18.3■□□□□ 0.52
IRF3-220ENST00000598108 FBLN5Q9UBX5 448 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 STEAP1Q9UHE8 339 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 STUB1Q9UNE7 303 aa18.3■□□□□ 0.52
IRF3-220ENST00000598108 TMEM272A0A1B0GTI8 110 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 IFITM5A6NNB3 132 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 FOXI3A8MTJ6 420 aaPredicted RBP18.29■□□□□ 0.52
IRF3-220ENST00000598108 SPINT2O43291 252 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 FGF9P31371 208 aaPredicted RBP18.29■□□□□ 0.52
IRF3-220ENST00000598108 KIR2DS4P43632 304 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 TMEM50BP56557 158 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 C6orf183Q5T699 404 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 Q6ZPA2 131 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 URM1Q9BTM9 101 aaKnown RBP18.29■□□□□ 0.52
IRF3-220ENST00000598108 OR51E2Q9H255 320 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 PLEKHJ1Q9NW61 149 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 PITPNC1Q9UKF7 332 aa18.29■□□□□ 0.52
IRF3-220ENST00000598108 TRRAPQ9Y4A5 3859 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 A0A0B4J203 849 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 SMIM30A4D0T7 59 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 RAB3BP20337 219 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 MADCAM1Q13477 382 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 OR4C13Q8NGP0 309 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 RPEQ96AT9 228 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 NPFFR1Q9GZQ6 430 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 ZNF702PQ9H963 129 aa18.28■□□□□ 0.52
IRF3-220ENST00000598108 AMMECR1Q9Y4X0 333 aaPredicted RBP18.28■□□□□ 0.52
IRF3-220ENST00000598108 OOSP1A8MZH6 123 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 SLC31A2O15432 143 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 BRS3P32247 399 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 VEGFCP49767 419 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 EFNB2P52799 333 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 Q6ZS46 218 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 OR10V1Q8NGI7 309 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 OR10X1Q8NGY0 326 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 TOMM40LQ969M1 308 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 CITED1Q99966 193 aa18.27■□□□□ 0.52
IRF3-220ENST00000598108 RANBP3Q9H6Z4 567 aaPredicted RBP18.27■□□□□ 0.52
IRF3-220ENST00000598108 A0A1W2PPI3 338 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 NAPSAO96009 420 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 ZNF134P52741 427 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 BLCAPP62952 87 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 HABP2Q14520 560 aaPredicted RBP18.26■□□□□ 0.51
IRF3-220ENST00000598108 CCDC144NLQ6NUI1 221 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 TRAT1Q6PIZ9 186 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 LINC00311Q8N616 119 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 C8orf31Q8N9H6 132 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 ZNF439Q8NDP4 499 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 SGMS2Q8NHU3 365 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 HDHD3Q9BSH5 251 aaPredicted RBP18.26■□□□□ 0.51
IRF3-220ENST00000598108 KCNIP1Q9NZI2 227 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 GNG12Q9UBI6 72 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 AK3Q9UIJ7 227 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 RAB22AQ9UL26 194 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 SSR3Q9UNL2 185 aa18.26■□□□□ 0.51
IRF3-220ENST00000598108 FAM90A9PA6NNJ1 464 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 TIMM23O14925 209 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 SLC2A2P11168 524 aaPredicted RBP18.25■□□□□ 0.51
IRF3-220ENST00000598108 GADD45AP24522 165 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 GNMTQ14749 295 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 CT45A1Q5HYN5 189 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 PLAC9Q5JTB6 97 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 ZNF880Q6PDB4 577 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 Q8N2B8 174 aa18.25■□□□□ 0.51
IRF3-220ENST00000598108 DRAM1Q8N682 238 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms