RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 SOCS1O15524 211 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 IL1AP01583 271 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 SLC2A2P11168 524 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-205ENST00000595993 JUNBP17275 347 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-205ENST00000595993 PSMD7P51665 324 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 C2orf76Q3KRA6 126 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 NKAPLQ5M9Q1 402 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 DYNAPQ8N1N2 210 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 GAPTQ8N292 157 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 OR4C13Q8NGP0 309 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 OR4K15Q8NH41 348 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 CCDC107Q8WV48 283 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 SULT4A1Q9BR01 284 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 CENPOQ9BU64 300 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 LINC00574Q9H8X3 128 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 ZNF286AQ9HBT8 521 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 ETAA1Q9NY74 926 aa12.83□□□□□ -0.36
USHBP1-205ENST00000595993 TMEM272A0A1B0GTI8 110 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 FOXI3A8MTJ6 420 aaPredicted RBP12.82□□□□□ -0.36
USHBP1-205ENST00000595993 NPIPB11E5RHQ5 1161 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 GLAP06280 429 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 CLEC2LP0C7M8 214 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 TGFBR1P36897 503 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
USHBP1-205ENST00000595993 RBM39Q14498 530 aaKnown RBP12.82□□□□□ -0.36
USHBP1-205ENST00000595993 LTC4SQ16873 150 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 LRRC75BQ2VPJ9 315 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 C6orf201Q7Z4U5 140 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 KLHDC1Q8N7A1 406 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 ZNF565Q8N9K5 539 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 UBALD1Q8TB05 177 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 PIFOQ8TCI5 191 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 CLEC7AQ9BXN2 247 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 RAB18Q9NP72 206 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 IDI2-AS1Q9NZ38 188 aa12.82□□□□□ -0.36
USHBP1-205ENST00000595993 A0A087X0M5 115 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 A0A1B0GX30 115 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 C15orf65H3BRN8 121 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
USHBP1-205ENST00000595993 NFYBP25208 207 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 CD34P28906 385 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 SDC2P34741 201 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 FAM189A2Q15884 450 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 OR52W1Q6IF63 320 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
USHBP1-205ENST00000595993 LIAT1Q6ZQX7 453 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 C5orf24Q7Z6I8 188 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 FAM89BQ8N5H3 189 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 OR4P4Q8NGL7 312 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 OR2T6Q8NHC8 308 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 MRPL30Q8TCC3 161 aaKnown RBP12.81□□□□□ -0.36
USHBP1-205ENST00000595993 WIPF2Q8TF74 440 aaPredicted RBP12.81□□□□□ -0.36
USHBP1-205ENST00000595993 LEAP2Q969E1 77 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 KCTD7Q96MP8 289 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 FAAP24Q9BTP7 215 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 LIN7BQ9HAP6 207 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
USHBP1-205ENST00000595993 TBL2Q9Y4P3 447 aaKnown RBP12.81□□□□□ -0.36
USHBP1-205ENST00000595993 NOTOA8MTQ0 251 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 CHST1O43916 411 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 IGLV1-47P01700 117 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 RCC1P18754 421 aaPredicted RBP12.8□□□□□ -0.36
USHBP1-205ENST00000595993 BLVRBP30043 206 aaPredicted RBP12.8□□□□□ -0.36
USHBP1-205ENST00000595993 LGALS4P56470 323 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 MXD1Q05195 221 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 TPRA1Q86W33 373 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 Q8N2B8 174 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 DTX3Q8N9I9 347 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 NEDD4LQ96PU5 975 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 URM1Q9BTM9 101 aaKnown RBP12.8□□□□□ -0.36
USHBP1-205ENST00000595993 RYR3Q15413 4870 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
USHBP1-205ENST00000595993 VGLL3A8MV65 326 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 ORC5O43913 435 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 CA11O75493 328 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 IGHV3-7P01780 117 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 VEGFCP49767 419 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 TMEM50BP56557 158 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 LY6EQ16553 131 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 PLA1AQ53H76 456 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 ARL11Q969Q4 196 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 NPFFR1Q9GZQ6 430 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 SERTAD4Q9NUC0 356 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 TRAPPC2LQ9UL33 140 aa12.79□□□□□ -0.36
USHBP1-205ENST00000595993 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 H3BUI4 141 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 GZMHP20718 246 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
USHBP1-205ENST00000595993 SSX2Q16385 188 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 HLA-DRB5Q30154 266 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 MOGAT2Q3SYC2 334 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 OXLD1Q5BKU9 147 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 PLAC9Q5JTB6 97 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 SFXN4Q6P4A7 337 aa12.78□□□□□ -0.36
USHBP1-205ENST00000595993 OR10A7Q8NGE5 316 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms