RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GLCCI1Q86VQ1 547 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 ARRDC1Q8N5I2 433 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 SPICQ8N5J4 248 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 OR4A4PQ8NGN8 299 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 OR6F1Q8NGZ6 308 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 MRGPRDQ8TDS7 321 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 MMP28Q9H239 520 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 TAF9BQ9HBM6 251 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 MBNL3Q9NUK0 354 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 OR6C3Q9NZP0 311 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 NUBP2Q9Y5Y2 271 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 TRGV10A0A0A0MS01 117 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 CEACAM18A8MTB9 384 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 WNT2P09544 360 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 RPS2P15880 293 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 BTCP35070 178 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 HMGN3Q15651 99 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 DEFB113Q30KQ7 82 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 Q6ZNX1 250 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 IDO2Q6ZQW0 420 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 BTN2A1Q7KYR7 527 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 NLRC3Q7RTR2 1065 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 C5orf24Q7Z6I8 188 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 KRTAP1-3Q8IUG1 177 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 PRR18Q8N4B5 295 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 OR8B3Q8NGG8 313 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 H1FXQ92522 213 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 NEIL1Q96FI4 390 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 OR8B2Q96RD0 313 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 SLC25A21Q9BQT8 299 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 GINS4Q9BRT9 223 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 RAB9BQ9NP90 201 aa10.83□□□□□ -0.68
SHKBP1-209ENST00000595803 hADV38S2A0JD32 116 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 BET1O15155 118 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 SPINT2O43291 252 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 NDUFB6O95139 128 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 DIRAS3O95661 229 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 H2AFB2P0C5Z0 115 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 IL2RGP31785 369 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 FCGR2CP31995 323 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 MEF2CQ06413 473 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 RBMS2Q15434 407 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 IGSF11Q5DX21 431 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 DHRS11Q6UWP2 260 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 ZNF554Q86TJ5 538 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 ZNF525Q8N782 197 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 OR13A1Q8NGR1 328 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 OR10J5Q8NHC4 309 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 TERB2Q8NHR7 220 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 GIMAP1Q8WWP7 306 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 IL1F10Q8WWZ1 152 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 ARL11Q969Q4 196 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 GALMQ96C23 342 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 SCGB3A2Q96PL1 93 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 ZNF2Q9BSG1 426 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 DCTN5Q9BTE1 182 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 SLC2A8Q9NY64 477 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 CTSZQ9UBR2 303 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 OPN4Q9UHM6 478 aa10.82□□□□□ -0.68
SHKBP1-209ENST00000595803 TRAV6A0A075B6T7 132 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 C12orf77C9JDV5 145 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 INMT-MINDY4F8WBC2 141 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 GPR37O15354 613 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 HSPA12AO43301 675 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 DHFRP00374 187 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 PAX1P15863 534 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 CR1LQ2VPA4 569 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 CLEC2AQ6UVW9 174 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 FGFRL1Q8N441 504 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 OR1L1Q8NH94 360 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 FAM168AQ92567 244 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 CORO2AQ92828 525 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 CREB3L1Q96BA8 519 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 PERPQ96FX8 193 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 KIRREL1Q96J84 757 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 LPAR3Q9UBY5 353 aa10.81□□□□□ -0.68
SHKBP1-209ENST00000595803 TRBV6-7A0A0A0MS04 114 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 FAM172BPA6NC97 362 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 NDUFS8O00217 210 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 ARPC1BO15143 372 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 HBZP02008 142 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 RLN1P04808 185 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 NFYAP23511 347 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 ECI1P42126 302 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 NPY4RP50391 375 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 DSCR9P59020 149 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 HERV-K104P61576 105 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 RPL31P62899 125 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 FAM185AQ8N0U4 392 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 OR13C8Q8NGS7 320 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 RFESDQ8TAC1 157 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 UBALD1Q8TB05 177 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 PIMREGQ9BSJ6 248 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 MARVELD1Q9BSK0 173 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 CABLES2Q9BTV7 478 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 TMPRSS13Q9BYE2 586 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 GSX2Q9BZM3 304 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 NARFLQ9H6Q4 476 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 TAS2R3Q9NYW6 316 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms