RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	MFNG	O00587	321 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	HOXA3	O43365	443 aa	Predicted RBP	18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	HBZ	P02008	142 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	MELTF	P08582	738 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	HIST1H1D	P16402	221 aa	Known RBP	18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	CD34	P28906	385 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081		Q6YL49	198 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	JMJD8	Q96S16	334 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	CMSS1	Q9BQ75	279 aa	Known RBP	18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	ABRACL	Q9P1F3	81 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	SPATA2	Q9UM82	520 aa		18.58	■□□□□ 0.56
PNKP-205	ENST00000595081	IGHV3-43	A0A0B4J1X8	118 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	SDCBP	O00560	298 aa	Predicted RBP	18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	SPINT2	O43291	252 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	TMEM127	O75204	238 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	IGHV3-43D	P0DP04	118 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	TRAT1	Q6PIZ9	186 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	OR10A7	Q8NGE5	316 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	C12orf4	Q9NQ89	552 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	TNFRSF19	Q9NS68	423 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	KCNIP1	Q9NZI2	227 aa		18.57	■□□□□ 0.56
PNKP-205	ENST00000595081	F2RL2	O00254	374 aa		18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	GNG10	P50151	68 aa		18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	SLC9A3R2	Q15599	337 aa		18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	ZNF880	Q6PDB4	577 aa		18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	DYNAP	Q8N1N2	210 aa		18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	OR4P4	Q8NGL7	312 aa		18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	RIMS4	Q9H426	269 aa	Predicted RBP	18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	ELF5	Q9UKW6	265 aa	Predicted RBP	18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	PSG11	Q9UQ72	335 aa		18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	TBL2	Q9Y4P3	447 aa	Known RBP	18.56	■□□□□ 0.56
PNKP-205	ENST00000595081	TRBV6-6	A0A0A6YYG2	114 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	TOR1A	O14656	332 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	IGLV1-47	P01700	117 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	IGHV4-59	P01825	116 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	CD3G	P09693	182 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	LOXL3	P58215	753 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	UBA52	P62987	128 aa	Known RBP	18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	SPCS2	Q15005	226 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	HMGN3	Q15651	99 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	LDLRAD3	Q86YD5	345 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	BEND2	Q8NDZ0	799 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	OR9G1	Q8NH87	305 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	ZNF596	Q8TC21	504 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	RAB2B	Q8WUD1	216 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081	GFOD1	Q9NXC2	390 aa		18.55	■□□□□ 0.56
PNKP-205	ENST00000595081		A0A1W2PPE3	182 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	RORC	P51449	518 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	TMBIM6	P55061	237 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	SSX2	Q16385	188 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	CDNF	Q49AH0	187 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	PLA1A	Q53H76	456 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	MOB1B	Q7L9L4	216 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	ZNF554	Q86TJ5	538 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	SAMD12	Q8N8I0	201 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	OR10V1	Q8NGI7	309 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	OR52M1	Q8NGK5	317 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	KCTD12	Q96CX2	325 aa	Known RBP	18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	RAB9B	Q9NP90	201 aa		18.54	■□□□□ 0.56
PNKP-205	ENST00000595081	SERPINE3	A8MV23	424 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081		J3QR06	171 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	SCGN	O76038	276 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	HTR1D	P28221	377 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	IER3	P46695	156 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	PRRX1	P54821	245 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	MRPS15	P82914	257 aa	Known RBP	18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	ARFRP1	Q13795	201 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	HLA-DRB5	Q30154	266 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	KRTAP24-1	Q3LI83	254 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	MINOS1	Q5TGZ0	78 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	OR52L2P	Q8NGH6	319 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	SSMEM1	Q8WWF3	244 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081		Q9N2K0	584 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	GNG12	Q9UBI6	72 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	HILPDA	Q9Y5L2	63 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	MINOS1-NBL1	R4GNA1	71 aa		18.53	■□□□□ 0.56
PNKP-205	ENST00000595081	TMEM235	A6NFC5	223 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	TRIM77	I1YAP6	450 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	GNMT	Q14749	295 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	KRTAP21-3	Q3LHN1	58 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	UBE2NL	Q5JXB2	153 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	IZUMO1	Q8IYV9	350 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	PHF21A	Q96BD5	680 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	ISOC1	Q96CN7	298 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	MALSU1	Q96EH3	234 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	MEGF9	Q9H1U4	602 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	MMP28	Q9H239	520 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	OR2S2	Q9NQN1	319 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	DPM3	Q9P2X0	92 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	COMMD3	Q9UBI1	195 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	CEPT1	Q9Y6K0	416 aa		18.52	■□□□□ 0.56
PNKP-205	ENST00000595081	TRAV18	A0A075B6X5	111 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	BUB1B-PAK6	H3BSN5	160 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	CLDN34	H7C241	214 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	NOL3	O60936	208 aa	Known RBP	18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	FCGR3A	P08637	254 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	HLA-DRB3	P79483	266 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	ARL6IP1	Q15041	203 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	TMEM30B	Q3MIR4	351 aa		18.51	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms