RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SLC22A1O15245 554 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 MRPS14O60783 128 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 ATP6V1G2O95670 118 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 MPIG6BO95866 241 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 JUNBP17275 347 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 INSL4Q14641 139 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 FAM27D1Q5T7N8 215 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 CCDC107Q8WV48 283 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 FAM46BQ96A09 425 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 NEDD4LQ96PU5 975 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 OCSTAMPQ9BR26 566 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 ACOT13Q9NPJ3 140 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 GFOD1Q9NXC2 390 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 KCNIP1Q9NZI2 227 aa14.21□□□□□ -0.13
SHKBP1-204ENST00000594862 TRAV39A0A0B4J263 110 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 HSD17B6O14756 317 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 TXNL1O43396 289 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 FBXO24O75426 580 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 CD37P11049 281 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 PSMD7P51665 324 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 GP2P55259 537 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 GABARAPL2P60520 117 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 RPS27AP62979 156 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 ZNF816Q0VGE8 651 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 SYT6Q5T7P8 510 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 TMEM203Q969S6 136 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 MOB4Q9Y3A3 225 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 LRRC42Q9Y546 428 aa14.2□□□□□ -0.14
SHKBP1-204ENST00000594862 A0A1W2PPI3 338 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 C12orf77C9JDV5 145 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 GAPDHP04406 335 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 VSIG8P0DPA2 414 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 BLCAPP62952 87 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 STEAP3Q658P3 488 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 OR2W3Q7Z3T1 314 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 SVOPQ8N4V2 548 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 LEAP2Q969E1 77 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 URM1Q9BTM9 101 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 TM2D1Q9BX74 207 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 WNT10AQ9GZT5 417 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 PLGRKTQ9HBL7 147 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 MBNL3Q9NUK0 354 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 GNG12Q9UBI6 72 aa14.19□□□□□ -0.14
SHKBP1-204ENST00000594862 FAM90A9PA6NNJ1 464 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 SLC17A2O00624 439 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 IGHV3-7P01780 117 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 LOXL3P58215 753 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 RPS25P62851 125 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 HABP2Q14520 560 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 NKAPLQ5M9Q1 402 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 UTF1Q5T230 341 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 SIGIRRQ6IA17 410 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 OR4K15Q8NH41 348 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 OR56B4Q8NH76 319 aa14.18□□□□□ -0.14
SHKBP1-204ENST00000594862 UBE2QL1A1L167 161 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 TMEM14DPA8MWL7 114 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 CCRL2O00421 344 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 TSPAN15O95858 294 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 HBZP02008 142 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 SNRNP70P08621 437 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 ARSBP15848 533 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 CD24P25063 80 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 CHATP28329 748 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 EMX1Q04741 257 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 HES1Q14469 280 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 TMEM91Q6ZNR0 172 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 MOB1BQ7L9L4 216 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 NDUFA11Q86Y39 141 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 DRAM1Q8N682 238 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 RIMS4Q9H426 269 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 TAF9BQ9HBM6 251 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 JPT1Q9UK76 154 aa14.17□□□□□ -0.14
SHKBP1-204ENST00000594862 FGF16O43320 207 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 RGS11O94810 467 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 TMEM11P17152 192 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 CALRP27797 417 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 MAP2K4P45985 399 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 ZNF137PP52743 207 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 RAB11BQ15907 218 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 ABCA11PQ4W5N1 156 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 SLC25A48Q6ZT89 311 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 IZUMO1Q8IYV9 350 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 MRPL30Q8TCC3 161 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 WIPF2Q8TF74 440 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 NDUFB11Q9NX14 153 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 ABRACLQ9P1F3 81 aa14.16□□□□□ -0.14
SHKBP1-204ENST00000594862 IGHV1-3A0A0C4DH29 117 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 PDCD5O14737 125 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 RCC1P18754 421 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 GALP22466 123 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 HTD2P86397 168 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 FABP5Q01469 135 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 UNC119Q13432 240 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 LY6G6FQ5SQ64 297 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 MOB3BQ86TA1 216 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 PRR18Q8N4B5 295 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 C11orf44Q8N8P7 122 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 OR4F17Q8NGA8 305 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 FCGR1BQ92637 280 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 GALMQ96C23 342 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms