RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 KCTD7Q96MP8 289 aa10.03□□□□□ -0.8
UPF1-203ENST00000594504 NEDD4LQ96PU5 975 aa10.03□□□□□ -0.8
UPF1-203ENST00000594504 CHCHD6Q9BRQ6 235 aa10.03□□□□□ -0.8
UPF1-203ENST00000594504 URM1Q9BTM9 101 aaKnown RBP10.03□□□□□ -0.8
UPF1-203ENST00000594504 TM2D1Q9BX74 207 aa10.03□□□□□ -0.8
UPF1-203ENST00000594504 KCNK15Q9H427 330 aa10.03□□□□□ -0.8
UPF1-203ENST00000594504 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
UPF1-203ENST00000594504 TBL2Q9Y4P3 447 aaKnown RBP10.03□□□□□ -0.8
UPF1-203ENST00000594504 DSCAML1Q8TD84 2053 aa10.03□□□□□ -0.8
UPF1-203ENST00000594504 LOC100506127A0A0U1RQW1 187 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 KBTBD11-OT1A0A1B0GTJ5 212 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 AIPO00170 330 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 CA11O75493 328 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 MMP23AO75900 390 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 CGB3P0DN86 165 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 CGB7P0DN87 165 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 CDK2P24941 298 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 CLDN12P56749 244 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 C17orf58Q2M2W7 97 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 HES5Q5TA89 166 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 PRAMEF5Q5TYX0 476 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 OR52W1Q6IF63 320 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 BAIAP2L2Q6UXY1 529 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 ZNF497Q6ZNH5 498 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 Q8N2B8 174 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 OR11H6Q8NGC7 330 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 MRAPQ8TCY5 172 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 WIPF2Q8TF74 440 aaPredicted RBP10.02□□□□□ -0.81
UPF1-203ENST00000594504 PRSS22Q9GZN4 317 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 TMEM133Q9H2Q1 129 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 LINC00574Q9H8X3 128 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 ETAA1Q9NY74 926 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 CALYQ9NYX4 217 aa10.02□□□□□ -0.81
UPF1-203ENST00000594504 A0A1W2PRX2 142 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 NOTOA8MTQ0 251 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 LDLRAD4O15165 306 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 IL1AP01583 271 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 MT-ND4P03905 459 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 GZMHP20718 246 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 CD24P25063 80 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 CHATP28329 748 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 C2orf76Q3KRA6 126 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 ARSJQ5FYB0 599 aaPredicted RBP10.01□□□□□ -0.81
UPF1-203ENST00000594504 NKAPLQ5M9Q1 402 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 NR2C2APQ86WQ0 139 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 GAPTQ8N292 157 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 MRGPRDQ8TDS7 321 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 YIPF6Q96EC8 236 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 NICN1Q9BSH3 213 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 CLEC7AQ9BXN2 247 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 LPAR5Q9H1C0 372 aa10.01□□□□□ -0.81
UPF1-203ENST00000594504 A0A0A6YYD4 124 aa10□□□□□ -0.81
UPF1-203ENST00000594504 IGHV2-26A0A0B4J1V2 119 aa10□□□□□ -0.81
UPF1-203ENST00000594504 TMEM272A0A1B0GTI8 110 aa10□□□□□ -0.81
UPF1-203ENST00000594504 UBE2QL1A1L167 161 aa10□□□□□ -0.81
UPF1-203ENST00000594504 NPIPB11E5RHQ5 1161 aa10□□□□□ -0.81
UPF1-203ENST00000594504 PEX14O75381 377 aa10□□□□□ -0.81
UPF1-203ENST00000594504 SMIM18P0DKX4 95 aa10□□□□□ -0.81
UPF1-203ENST00000594504 CD34P28906 385 aa10□□□□□ -0.81
UPF1-203ENST00000594504 BLVRBP30043 206 aaPredicted RBP10□□□□□ -0.81
UPF1-203ENST00000594504 SDC2P34741 201 aa10□□□□□ -0.81
UPF1-203ENST00000594504 RTN4RL2Q86UN3 420 aa10□□□□□ -0.81
UPF1-203ENST00000594504 NDUFA11Q86Y39 141 aa10□□□□□ -0.81
UPF1-203ENST00000594504 FAM89BQ8N5H3 189 aa10□□□□□ -0.81
UPF1-203ENST00000594504 OR10A7Q8NGE5 316 aa10□□□□□ -0.81
UPF1-203ENST00000594504 KIRREL1Q96J84 757 aa10□□□□□ -0.81
UPF1-203ENST00000594504 OCSTAMPQ9BR26 566 aa10□□□□□ -0.81
UPF1-203ENST00000594504 CENPOQ9BU64 300 aa10□□□□□ -0.81
UPF1-203ENST00000594504 LIN7BQ9HAP6 207 aa10□□□□□ -0.81
UPF1-203ENST00000594504 AURKAIP1Q9NWT8 199 aaPredicted RBP10□□□□□ -0.81
UPF1-203ENST00000594504 RAB22AQ9UL26 194 aa10□□□□□ -0.81
UPF1-203ENST00000594504 A0A087X0M5 115 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 TRAV39A0A0B4J263 110 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 A0A1B0GX30 115 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 SMIM30A4D0T7 59 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 FAM172BPA6NC97 362 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 F2RL2O00254 374 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 ORC5O43913 435 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 AIREO43918 545 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 IGLL1P15814 213 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 RAB6AP20340 208 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 SSTR5P35346 364 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 GDNFP39905 211 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 C6orf183Q5T699 404 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 FOXB2Q5VYV0 432 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 SFXN4Q6P4A7 337 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 TRAT1Q6PIZ9 186 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 C6orf201Q7Z4U5 140 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 ABHD12Q8N2K0 398 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 DTX3Q8N9I9 347 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 OR5AU1Q8NGC0 362 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 OR56B1Q8NGI3 324 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 NDNFQ8TB73 568 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 CCDC107Q8WV48 283 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 PTX4Q96A99 478 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 PHF21AQ96BD5 680 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 SULT4A1Q9BR01 284 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 MRPS26Q9BYN8 205 aaKnown RBP9.99□□□□□ -0.81
UPF1-203ENST00000594504 RNF167Q9H6Y7 350 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms