RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CLN8Q9UBY8 286 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 POLR3KQ9Y2Y1 108 aaPredicted RBP16.31■□□□□ 0.2
LSM4-203ENST00000593829 OR5H14A6NHG9 310 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 PHF1O43189 567 aaPredicted RBP16.31■□□□□ 0.2
LSM4-203ENST00000593829 KDM4BO94953 1096 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 ZNF735P0CB33 412 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 FSTP19883 344 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 STUMQ69YW2 141 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 C11orf87Q6NUJ2 197 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 ZNF488Q96MN9 340 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 NRIP2Q9BQI9 281 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 NKX6-2Q9C056 277 aaPredicted RBP16.31■□□□□ 0.2
LSM4-203ENST00000593829 SLC2A8Q9NY64 477 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 CTSZQ9UBR2 303 aa16.31■□□□□ 0.2
LSM4-203ENST00000593829 KIAA1324LA8MWY0 1029 aaPredicted RBP16.3■□□□□ 0.2
LSM4-203ENST00000593829 TMPRSS2O15393 492 aa16.3■□□□□ 0.2
LSM4-203ENST00000593829 PLATP00750 562 aa16.3■□□□□ 0.2
LSM4-203ENST00000593829 NPY4RP50391 375 aa16.3■□□□□ 0.2
LSM4-203ENST00000593829 ZNF841Q6ZN19 808 aa16.3■□□□□ 0.2
LSM4-203ENST00000593829 SLC25A26Q70HW3 274 aa16.3■□□□□ 0.2
LSM4-203ENST00000593829 PTX4Q96A99 478 aa16.3■□□□□ 0.2
LSM4-203ENST00000593829 CCL13Q99616 98 aa16.3■□□□□ 0.2
LSM4-203ENST00000593829 PPIAL4CA0A0B4J2A2 164 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 OR2AT4A6NND4 320 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 HCKP08631 526 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 CR1LQ2VPA4 569 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 SMIM21Q3B7S5 101 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 ATPAF1Q5TC12 328 aaPredicted RBP16.29■□□□□ 0.2
LSM4-203ENST00000593829 WDR25Q64LD2 544 aaPredicted RBP16.29■□□□□ 0.2
LSM4-203ENST00000593829 ZNF529Q6P280 563 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 ACP7Q6ZNF0 438 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 ATG5Q9H1Y0 275 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 TAS2R4Q9NYW5 299 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 TAS2R3Q9NYW6 316 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 NUPL2O15504 423 aaKnown RBP16.29■□□□□ 0.2
LSM4-203ENST00000593829 NXPH2O95156 264 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 CYB5AP00167 134 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 GATA3P23771 443 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 PAN3Q58A45 887 aaKnown RBP16.29■□□□□ 0.2
LSM4-203ENST00000593829 FAM120AOSQ5T036 256 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 LIN54Q6MZP7 749 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 FAHD2BQ6P2I3 314 aaPredicted RBP16.29■□□□□ 0.2
LSM4-203ENST00000593829 ACOT7LQ6ZUV0 252 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 MKXQ8IYA7 352 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 BPIFCQ8NFQ6 507 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 FAHD2AQ96GK7 314 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 SPACA5Q96QH8 159 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 MTCH1Q9NZJ7 389 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 CDC42EP3Q9UKI2 254 aa16.29■□□□□ 0.2
LSM4-203ENST00000593829 LDLRAD4O15165 306 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 IGFBP3P17936 291 aaPredicted RBP16.28■□□□□ 0.2
LSM4-203ENST00000593829 ERVK11-1P61568 191 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 MEF2DQ14814 521 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 ASPHD2Q6ICH7 369 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 C17orf107Q6ZR85 190 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 SLAMF9Q96A28 289 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 CPNE2Q96FN4 548 aaPredicted RBP16.28■□□□□ 0.2
LSM4-203ENST00000593829 HES4Q9HCC6 221 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 COMMD9Q9P000 198 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 LPAR3Q9UBY5 353 aa16.28■□□□□ 0.2
LSM4-203ENST00000593829 NIPBLQ6KC79 2804 aaeCLIP16.28■□□□□ 0.2
LSM4-203ENST00000593829 FN1P02751 2386 aaKnown RBP16.27■□□□□ 0.2
LSM4-203ENST00000593829 MEGF11A6BM72 1044 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 RNF222A6NCQ9 220 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 NKX6-3A6NJ46 265 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 TRAPPC2LH3BP13 241 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 CRLF1O75462 422 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 PSG2P11465 335 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 HNF1AP20823 631 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 CD34P28906 385 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 CAPZA1P52907 286 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 PDZK1IP1Q13113 114 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 DHRS2Q13268 280 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 KISS1Q15726 138 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 OR2W3Q7Z3T1 314 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 BATF2Q8N1L9 274 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 MMP26Q9NRE1 261 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 CKLFQ9UBR5 152 aa16.27■□□□□ 0.2
LSM4-203ENST00000593829 FAM74A7A6NL05 159 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 NUDT19A8MXV4 375 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 DVL1O14640 695 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 AMY2BP19961 511 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 FAM74A3Q4VXF1 159 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 ZNF788Q6ZQV5 615 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 Q8IYB0 196 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 FAM216BQ8N7L0 139 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 ZDHHC22Q8N966 263 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 OR51A2Q8NGJ7 313 aa16.27■□□□□ 0.19
LSM4-203ENST00000593829 SONP18583 2426 aaKnown RBP16.27■□□□□ 0.19
LSM4-203ENST00000593829 IGKV1D-17A0A075B6S4 117 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 J3QLI3 93 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 SPRY1O43609 319 aaPredicted RBP16.26■□□□□ 0.19
LSM4-203ENST00000593829 ATG12O94817 140 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 AMY2AP04746 511 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 HTR2CP28335 458 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 GABRA2P47869 451 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 IL13RA1P78552 427 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 DEFA5Q01523 94 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 CHRFAM7AQ494W8 412 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 RNF144BQ7Z419 303 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms