RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRAV24A0A0B4J272 114 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 A6NHS1 94 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 J3QR06 171 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 CSTBP04080 98 aaKnown RBP8.25□□□□□ -1.09
VPS4B-207ENST00000591519 CD1AP06126 327 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 MAPK3P27361 379 aaPredicted RBP8.25□□□□□ -1.09
VPS4B-207ENST00000591519 PSMB9P28065 219 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 GABARAPL2P60520 117 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 EGFEM1PQ0D2K5 195 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
VPS4B-207ENST00000591519 TBCEQ15813 527 aaPredicted RBP8.25□□□□□ -1.09
VPS4B-207ENST00000591519 PIGYQ3MUY2 71 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 C10orf99Q6UWK7 81 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 GLIPR1L1Q6UWM5 242 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 ZNF367Q7RTV3 350 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 OSR2Q8N2R0 312 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 MS4A15Q8N5U1 240 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 OR10A7Q8NGE5 316 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 BARHL1Q9BZE3 327 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 METTL9Q9H1A3 318 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 PPIL3Q9H2H8 161 aaKnown RBP8.25□□□□□ -1.09
VPS4B-207ENST00000591519 ACOT13Q9NPJ3 140 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 ZNF581Q9P0T4 197 aa8.25□□□□□ -1.09
VPS4B-207ENST00000591519 MRPS28Q9Y2Q9 187 aaKnown RBP8.25□□□□□ -1.09
VPS4B-207ENST00000591519 A0A1W2PP11 408 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 FAM172BPA6NC97 362 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 K7EIL1 84 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 GPX5O75715 221 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 PF4P02776 101 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 CPEP16870 476 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 SLC6A1P30531 599 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 KCNJ3P48549 501 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 FABP5Q01469 135 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 TPBGQ13641 420 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 IL13RA2Q14627 380 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 ATXN7L3Q14CW9 347 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-207ENST00000591519 HSD17B12Q53GQ0 312 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 PAN3Q58A45 887 aaKnown RBP8.24□□□□□ -1.09
VPS4B-207ENST00000591519 RSBN1Q5VWQ0 802 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-207ENST00000591519 AWAT2Q6E213 333 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 UNQ9370/PRO34162Q6UXP9 181 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 RPEQ96AT9 228 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 BANF2Q9H503 90 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 IFT22Q9H7X7 185 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 ISYNA1Q9NPH2 558 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 CALYQ9NYX4 217 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 IDI2-AS1Q9NZ38 188 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 PSG11Q9UQ72 335 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 MOB4Q9Y3A3 225 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 AMMECR1Q9Y4X0 333 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-207ENST00000591519 DNAH3Q8TD57 4116 aa8.24□□□□□ -1.09
VPS4B-207ENST00000591519 MEIKINA0A087WXM9 373 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 A0A1W2PPI3 338 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 PSMB11A5LHX3 300 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
VPS4B-207ENST00000591519 FGF16O43320 207 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 MPIG6BO95866 241 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 IL1AP01583 271 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 GZMHP20718 246 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 NFYBP25208 207 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 RAB7AP51149 207 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 KRTAP10-11P60412 298 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 MADCAM1Q13477 382 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 GPR50Q13585 617 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 EBI3Q14213 229 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 NEDD8Q15843 81 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 SSX1Q16384 188 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 ATAD3CQ5T2N8 411 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 TMEM91Q6ZNR0 172 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 LRRTM1Q86UE6 522 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 SPARTQ8N0X7 666 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 OR8H3Q8N146 312 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 C5orf56Q8N8D9 126 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 LINC00482Q8N8I6 264 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 OR13A1Q8NGR1 328 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 CHPT1Q8WUD6 406 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 THRSPQ92748 146 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 FAM46BQ96A09 425 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 KCNK15Q9H427 330 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 ZFP57Q9NU63 452 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 KIF25Q9UIL4 384 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 ST3GAL6Q9Y274 331 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 LRRC42Q9Y546 428 aa8.23□□□□□ -1.09
VPS4B-207ENST00000591519 GEMIN2O14893 280 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 CRTAPO75718 401 aaPredicted RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 OR7C1O76099 320 aaPredicted RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 IGHG2P01859 326 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 SNRNP70P08621 437 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 UCHL1P09936 223 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 SRMP19623 302 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 CALRP27797 417 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 THBS3P49746 956 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 RBM11P57052 281 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 DIAPH2-AS1Q14236 149 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 RBM39Q14498 530 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 P2RY14Q15391 338 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 NHLRC3Q5JS37 347 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 VAX1Q5SQQ9 334 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 ZNF773Q6PK81 442 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 ETV3LQ6ZN32 361 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms