RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, human

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-205	ENST00000590000	MINOS1	Q5TGZ0	78 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	SIGIRR	Q6IA17	410 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	RAB12	Q6IQ22	244 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	ZNF367	Q7RTV3	350 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	C5orf24	Q7Z6I8	188 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	LINC00596	Q86U02	117 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	MRPL41	Q8IXM3	137 aa	Known RBP	11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	SPART	Q8N0X7	666 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	WWC2-AS2	Q96NR7	200 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	B9D2	Q9BPU9	175 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	NCOR1P1	Q9H4R4	102 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	IDI2-AS1	Q9NZ38	188 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	MINOS1-NBL1	R4GNA1	71 aa		11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000	EPPK1	P58107	5090 aa	Known RBP	11.21	□□□□□ -0.61
SAFB2-205	ENST00000590000		A0A1W2PPE3	182 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	TMEM30CP	A0ZSE6	113 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	MCRIP1	C9JLW8	97 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	PEX14	O75381	377 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	IGLV1-47	P01700	117 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	PF4	P02776	101 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	CALR	P27797	417 aa	Known RBP	11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	HTR1D	P28221	377 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	HTR2C	P28335	458 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	SSTR5	P35346	364 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	KCNJ3	P48549	501 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	GABARAPL2	P60520	117 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	RBM39	Q14498	530 aa	Known RBP	11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	TRAM1	Q15629	374 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	TBCE	Q15813	527 aa	Predicted RBP	11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	NKAPL	Q5M9Q1	402 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	DTX3	Q8N9I9	347 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	OR4K15	Q8NH41	348 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	MRPS24	Q96EL2	167 aa	Known RBP	11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	RCC1L	Q96I51	464 aa	Known RBP	11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	KIRREL1	Q96J84	757 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000		Q96M66	194 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	SLC25A33	Q9BSK2	321 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	ETAA1	Q9NY74	926 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	DPM3	Q9P2X0	92 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	LRRC42	Q9Y546	428 aa		11.2	□□□□□ -0.62
SAFB2-205	ENST00000590000	DNAH7	Q8WXX0	4024 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	NPIPB11	E5RHQ5	1161 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	LY6L	H3BQJ8	138 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	CD37	P11049	281 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	GZMH	P20718	246 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	FUT3	P21217	361 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	PRRX1	P54821	245 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	ZNF497	Q6ZNH5	498 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	ZNF329	Q86UD4	541 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	RTN4RL2	Q86UN3	420 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	ARL11	Q969Q4	196 aa		11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	RCC2	Q9P258	522 aa	Known RBP	11.19	□□□□□ -0.62
SAFB2-205	ENST00000590000	DNAH1	Q9P2D7	4330 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	IGHV3-43	A0A0B4J1X8	118 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	LEUTX	A8MZ59	168 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	AIP	O00170	330 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	SLC22A1	O15245	554 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	IL1A	P01583	271 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	SNRNP70	P08621	437 aa	Known RBP	11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	IGHV3-43D	P0DP04	118 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	PSMA1	P25786	263 aa	Known RBP	11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	CD34	P28906	385 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	GNG10	P50151	68 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	CLDN12	P56749	244 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	QRFP	P83859	136 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	UNC119	Q13432	240 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	SYT6	Q5T7P8	510 aa	Predicted RBP	11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	SVOP	Q8N4V2	548 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	ZNF596	Q8TC21	504 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	RBM14	Q96PK6	669 aa	Known RBP	11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	NICN1	Q9BSH3	213 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAAP24	Q9BTP7	215 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	CST11	Q9H112	138 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	LINC00574	Q9H8X3	128 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	LIN7B	Q9HAP6	207 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	PLGRKT	Q9HBL7	147 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	SPACA1	Q9HBV2	294 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	GHRL	Q9UBU3	117 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	TRAPPC2L	Q9UL33	140 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000	PSG11	Q9UQ72	335 aa		11.18	□□□□□ -0.62
SAFB2-205	ENST00000590000		A0A087X0M5	115 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000		A0A1B0GX30	115 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	SHISA3	A0PJX4	238 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A10P	A6NDY2	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A18P	A6NE21	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A16P	A6NEW6	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A20P	A6NIJ5	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A7P	A6NKC0	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A12P	A8MX19	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A5P	A8MXJ8	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	FAM90A23P	A8MXZ1	464 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	C15orf65	H3BRN8	121 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000	BUB1B-PAK6	H3BSN5	160 aa		11.17	□□□□□ -0.62
SAFB2-205	ENST00000590000		J3QR06	171 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms