RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CNBD2Q96M20 576 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 PLSCR3Q9NRY6 295 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 GFOD1Q9NXC2 390 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 SERPINE3A8MV23 424 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 C12orf77C9JDV5 145 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 GAPDHP04406 335 aaKnown RBP14.18□□□□□ -0.14
H3F3B-209ENST00000589949 ZNF134P52741 427 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 LCNL1Q6ZST4 164 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 SLC35E3Q7Z769 313 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 LINC00596Q86U02 117 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 LYPD6Q86Y78 171 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 LINC00311Q8N616 119 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 Q8N9W7 124 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 ZNF439Q8NDP4 499 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 GGHQ92820 318 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 MUL1Q969V5 352 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 DUX3Q96PT4 197 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 OR14A2Q96R54 314 aa14.18□□□□□ -0.14
H3F3B-209ENST00000589949 RCC2Q9P258 522 aaKnown RBP14.18□□□□□ -0.14
H3F3B-209ENST00000589949 EXOSC1Q9Y3B2 195 aaKnown RBP14.18□□□□□ -0.14
H3F3B-209ENST00000589949 PNMA8CA0A1B0GUJ8 204 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 ORC5O43913 435 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 GNAO1P09471 354 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 GTF2F2P13984 249 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 Q499Y3 187 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 IZUMO1Q8IYV9 350 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 STPG2Q8N412 459 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 C8orf31Q8N9H6 132 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 CHPT1Q8WUD6 406 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 RTN4IP1Q8WWV3 396 aaPredicted RBP14.17□□□□□ -0.14
H3F3B-209ENST00000589949 TMEM80Q96HE8 168 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 P2RX4Q99571 388 aa14.17□□□□□ -0.14
H3F3B-209ENST00000589949 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
H3F3B-209ENST00000589949 AIPO00170 330 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 MYL12AP19105 171 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 FSTP19883 344 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 GPR12P47775 334 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 ST3GAL4Q11206 333 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 YIF1BQ5BJH7 314 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 CT45A1Q5HYN5 189 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 SIGIRRQ6IA17 410 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 C11orf87Q6NUJ2 197 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 GLIPR1L1Q6UWM5 242 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 TGIF2LXQ8IUE1 241 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 C8orf59Q8N0T1 100 aaPredicted RBP14.16□□□□□ -0.14
H3F3B-209ENST00000589949 SETD9Q8NE22 299 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 OR4K15Q8NH41 348 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 OR1L1Q8NH94 360 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 CT45A3Q8NHU0 189 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 NEK7Q8TDX7 302 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 S100A13Q99584 98 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 ABCG5Q9H222 651 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 BANF2Q9H503 90 aa14.16□□□□□ -0.14
H3F3B-209ENST00000589949 PAK1IP1Q9NWT1 392 aaPredicted RBP14.16□□□□□ -0.14
H3F3B-209ENST00000589949 NCBP2LA6PVI3 153 aaKnown RBP14.15□□□□□ -0.14
H3F3B-209ENST00000589949 ZNF780AO75290 641 aaPredicted RBP14.15□□□□□ -0.14
H3F3B-209ENST00000589949 DUS4LO95620 317 aaKnown RBP14.15□□□□□ -0.14
H3F3B-209ENST00000589949 RCC1P18754 421 aaPredicted RBP14.15□□□□□ -0.14
H3F3B-209ENST00000589949 F2RL1P55085 397 aa14.15□□□□□ -0.14
H3F3B-209ENST00000589949 SYT6Q5T7P8 510 aaPredicted RBP14.15□□□□□ -0.14
H3F3B-209ENST00000589949 GAPTQ8N292 157 aa14.15□□□□□ -0.14
H3F3B-209ENST00000589949 JAGN1Q8N5M9 183 aa14.15□□□□□ -0.14
H3F3B-209ENST00000589949 KLHL30-AS1Q8NEE0 82 aa14.15□□□□□ -0.14
H3F3B-209ENST00000589949 OR10V1Q8NGI7 309 aa14.15□□□□□ -0.14
H3F3B-209ENST00000589949 DERL3Q96Q80 235 aa14.15□□□□□ -0.14
H3F3B-209ENST00000589949 HSPB9Q9BQS6 159 aa14.15□□□□□ -0.14
H3F3B-209ENST00000589949 IRGMA1A4Y4 181 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 MAS1P04201 325 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 RPLP1P05386 114 aaKnown RBP14.14□□□□□ -0.15
H3F3B-209ENST00000589949 ZNF137PP52743 207 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 INSL4Q14641 139 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 DEFB121Q5J5C9 76 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 RAB12Q6IQ22 244 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 SLC25A48Q6ZT89 311 aaKnown RBP14.14□□□□□ -0.15
H3F3B-209ENST00000589949 OR2T10Q8NGZ9 312 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 RAX2Q96IS3 184 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 ZFP57Q9NU63 452 aa14.14□□□□□ -0.15
H3F3B-209ENST00000589949 NUDT19A8MXV4 375 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 MCRIP1C9JLW8 97 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 HBZP02008 142 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 CD1BP29016 333 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 MYCNOSP40205 109 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 GP2P55259 537 aaKnown RBP14.13□□□□□ -0.15
H3F3B-209ENST00000589949 ZNF695Q8IW36 515 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 FOXRED2Q8IWF2 684 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 PRR18Q8N4B5 295 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 OR51D1Q8NGF3 324 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 FBLIM1Q8WUP2 373 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 S1PR3Q99500 378 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 YTHDF1Q9BYJ9 559 aaKnown RBP14.13□□□□□ -0.15
H3F3B-209ENST00000589949 LIN7CQ9NUP9 197 aaKnown RBP14.13□□□□□ -0.15
H3F3B-209ENST00000589949 ETAA1Q9NY74 926 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 CKLFQ9UBR5 152 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 TRAPPC2LQ9UL33 140 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 PEX16Q9Y5Y5 336 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 DNAH9Q9NYC9 4486 aa14.13□□□□□ -0.15
H3F3B-209ENST00000589949 AP4M1O00189 453 aa14.12□□□□□ -0.15
H3F3B-209ENST00000589949 SC5DO75845 299 aa14.12□□□□□ -0.15
H3F3B-209ENST00000589949 MOSP00540 346 aa14.12□□□□□ -0.15
H3F3B-209ENST00000589949 MGMTP16455 207 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms