RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	RBM39	Q14498	530 aa	Known RBP	13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	C6orf201	Q7Z4U5	140 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	OR51D1	Q8NGF3	324 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	OR52M1	Q8NGK5	317 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	OR1L1	Q8NH94	360 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	FAAP24	Q9BTP7	215 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	ZNF702P	Q9H963	129 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	GFOD1	Q9NXC2	390 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	FBLN5	Q9UBX5	448 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867		V9GY05	133 aa		13.88	□□□□□ -0.19
MBD1-221	ENST00000589867	IGHV3-43	A0A0B4J1X8	118 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	TOR1A	O14656	332 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	SOCS1	O15524	211 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	CA11	O75493	328 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	IGHV3-43D	P0DP04	118 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	GAL	P22466	123 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	PSMB9	P28065	219 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	KIR2DS4	P43632	304 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	EFNB2	P52799	333 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	PRRX1	P54821	245 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	TMEM50B	P56557	158 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	RAB11B	Q15907	218 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	KCTD21	Q4G0X4	260 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	NKAPL	Q5M9Q1	402 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	C22orf42	Q6IC83	251 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	LIAT1	Q6ZQX7	453 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	SLC16A12	Q6ZSM3	486 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	OR2W3	Q7Z3T1	314 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	ZNF439	Q8NDP4	499 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	FAM3D	Q96BQ1	224 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	PLGRKT	Q9HBL7	147 aa		13.87	□□□□□ -0.19
MBD1-221	ENST00000589867	TMEM272	A0A1B0GTI8	110 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867		A0A1W2PPI3	338 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	FAM90A9P	A6NNJ1	464 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	SLC31A2	O15432	143 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	HBZ	P02008	142 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	ARSB	P15848	533 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	GNG10	P50151	68 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	ZNF134	P52741	427 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	C2orf76	Q3KRA6	126 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	HES5	Q5TA89	166 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	ZNF880	Q6PDB4	577 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867		Q8N2B8	174 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	LINC00311	Q8N616	119 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	CFHR4	Q92496	578 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	FCGR1B	Q92637	280 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	ABCB10	Q9NRK6	738 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	TXNL4B	Q9NX01	149 aa	Known RBP	13.86	□□□□□ -0.19
MBD1-221	ENST00000589867	TRAPPC2L	Q9UL33	140 aa		13.86	□□□□□ -0.19
MBD1-221	ENST00000589867		A0A0B4J203	849 aa		13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	SDCBP	O00560	298 aa	Predicted RBP	13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	NAPSA	O96009	420 aa		13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	BLVRB	P30043	206 aa	Predicted RBP	13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	FGF9	P31371	208 aa	Predicted RBP	13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	BLCAP	P62952	87 aa		13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	HABP2	Q14520	560 aa	Predicted RBP	13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	ST6GALNAC6	Q969X2	333 aa		13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	TAF9B	Q9HBM6	251 aa		13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	RAB18	Q9NP72	206 aa		13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	SERTAD4	Q9NUC0	356 aa		13.85	□□□□□ -0.19
MBD1-221	ENST00000589867	IFITM5	A6NNB3	132 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	OOSP1	A8MZH6	123 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	AMY1A	P04745	511 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	AMY2A	P04746	511 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	GNMT	Q14749	295 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	PLAC9	Q5JTB6	97 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	HIST2H2BD	Q6DRA6	164 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	C8orf31	Q8N9H6	132 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	CREB3L1	Q96BA8	519 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	NEDD4L	Q96PU5	975 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	OR51E2	Q9H255	320 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	RNF167	Q9H6Y7	350 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	STEAP1	Q9UHE8	339 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	STUB1	Q9UNE7	303 aa		13.84	□□□□□ -0.19
MBD1-221	ENST00000589867	SMIM30	A4D0T7	59 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	TIMM23	O14925	209 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	CEACAM3	P40198	252 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	HMGN3	Q15651	99 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	MOGAT2	Q3SYC2	334 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	CT45A1	Q5HYN5	189 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	PRR31	Q5SQ13	230 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	C6orf183	Q5T699	404 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	SLC25A48	Q6ZT89	311 aa	Known RBP	13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	OR10V1	Q8NGI7	309 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	CT45A3	Q8NHU0	189 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	SGMS2	Q8NHU3	365 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	WIPF2	Q8TF74	440 aa	Predicted RBP	13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	RBMXL1	Q96E39	390 aa	Known RBP	13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	NPFFR1	Q9GZQ6	430 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	ZNF696	Q9H7X3	374 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	AK3	Q9UIJ7	227 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	PITPNC1	Q9UKF7	332 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867	KCNK7	Q9Y2U2	307 aa		13.83	□□□□□ -0.2
MBD1-221	ENST00000589867		H3BUI4	141 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	SLC2A2	P11168	524 aa	Predicted RBP	13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	RAB3B	P20337	219 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	VEGFC	P49767	419 aa		13.82	□□□□□ -0.2
MBD1-221	ENST00000589867	PSMD7	P51665	324 aa		13.82	□□□□□ -0.2

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