RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RPS23P62266 143 aaKnown RBP12.51□□□□□ -0.41
RETREG3-208ENST00000589797 BIVMQ86UB2 503 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 OR1L1Q8NH94 360 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 STRAPQ9Y3F4 350 aaKnown RBP12.51□□□□□ -0.41
RETREG3-208ENST00000589797 OR2W1Q9Y3N9 320 aa12.51□□□□□ -0.41
RETREG3-208ENST00000589797 OR8U8P0C7N1 319 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 S100PP25815 95 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 FAM27E3Q08E93 113 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 ZCCHC24Q8N2G6 241 aaKnown RBP12.5□□□□□ -0.41
RETREG3-208ENST00000589797 BVESQ8NE79 360 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 NABP1Q96AH0 204 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 IGKV1-12A0A0C4DH73 117 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 IGKV1D-12P01611 117 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 MBPP02686 304 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-208ENST00000589797 NTF4P34130 210 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 C4orf17Q53FE4 359 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 CXXC4Q9H2H0 198 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 C19orf12Q9NSK7 152 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 ZNF107Q9UII5 783 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-208ENST00000589797 H0YL77 283 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 SNRPCP09234 159 aaKnown RBP12.5□□□□□ -0.41
RETREG3-208ENST00000589797 MPV17LQ2QL34 196 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 SHARPINQ9H0F6 387 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 MMP24Q9Y5R2 645 aa12.5□□□□□ -0.41
RETREG3-208ENST00000589797 ZNF883P0CG24 379 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 DHODHQ02127 395 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 HGFACQ04756 655 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 SURF2Q15527 256 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-208ENST00000589797 SIGIRRQ6IA17 410 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 DCTN5Q9BTE1 182 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 TRANK1O15050 2925 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 VPS13AQ96RL7 3174 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 TRGV10A0A0A0MS01 117 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 NKX6-3A6NJ46 265 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 REG1BP48304 166 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 INO80CQ6PI98 192 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-208ENST00000589797 TMEM108Q6UXF1 575 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 ABCD4O14678 606 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 ZNF787Q6DD87 383 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 EDARADDQ8WWZ3 215 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 RND1Q92730 232 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 TP53RKQ96S44 253 aa12.49□□□□□ -0.41
RETREG3-208ENST00000589797 SPEGQ15772 3267 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 IGKV1-27A0A075B6S5 117 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 COL10A1Q03692 680 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 KIAA0141Q14154 515 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-208ENST00000589797 DHRS9Q9BPW9 319 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 LINC00862A6NCI5 91 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 LILRA1O75019 489 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 B3GALNT1O75752 331 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 ARG1P05089 322 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 GLIPR1P48060 266 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 STPG2Q8N412 459 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 PROK2Q9HC23 129 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 PNRC2Q9NPJ4 139 aaKnown RBP12.48□□□□□ -0.41
RETREG3-208ENST00000589797 WDFY4Q6ZS81 3184 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 FOXF2Q12947 444 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 CSRP2Q16527 193 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 KCNMB1Q16558 191 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 RNFT1Q5M7Z0 435 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 ZNF818PQ6ZRF7 136 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 GNPNAT1Q96EK6 184 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-208ENST00000589797 WBP1Q96G27 269 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 PRDM14Q9GZV8 571 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 SPRR3Q9UBC9 169 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-208ENST00000589797 V9GYS6 101 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 ARFGEF3Q5TH69 2177 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 MALRD1Q5VYJ5 2156 aa12.48□□□□□ -0.41
RETREG3-208ENST00000589797 HBE1P02100 147 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 ZNF735P0CB33 412 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 HOXA4Q00056 320 aaPredicted RBP12.47□□□□□ -0.41
RETREG3-208ENST00000589797 LY6G6FQ5SQ64 297 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 C9orf106Q8NAJ2 232 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 ZNRF1Q8ND25 227 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
RETREG3-208ENST00000589797 SLC25A22Q9H936 323 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 SYNGR2O43760 224 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.41
RETREG3-208ENST00000589797 PSG7Q13046 419 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 OR4F5Q8NH21 305 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 ITLN1Q8WWA0 313 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 OR4F4Q96R69 305 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 CCL13Q99616 98 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 SSX3Q99909 188 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 REPIN1Q9BWE0 567 aaKnown RBP12.47□□□□□ -0.41
RETREG3-208ENST00000589797 RNF122Q9H9V4 155 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 MED9Q9NWA0 146 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 NDRG3Q9UGV2 375 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 EYSQ5T1H1 3165 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 ZNF727A8MUV8 499 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 MELTFP08582 738 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 NAT2P11245 290 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 WDYHV1Q96HA8 205 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 TRAF4Q9BUZ4 470 aaPredicted RBP12.47□□□□□ -0.41
RETREG3-208ENST00000589797 SMCO4Q9NRQ5 59 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms