RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 RAB3DO95716 219 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CYB5R3P00387 301 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 NRASP01111 189 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 LIPFP07098 398 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SNRNP70P08621 437 aaKnown RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CD3GP09693 182 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 NR2C1P13056 603 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ATF1P18846 271 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 RAB3BP20337 219 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 OMGP23515 440 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 TIMP3P35625 211 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 GABRA2P47869 451 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 VEGFCP49767 419 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 AKR1D1P51857 326 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CAPZA1P52907 286 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 TMBIM6P55061 237 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 PCBD1P61457 104 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 IFITM3Q01628 133 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 IL18Q14116 193 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 EDDM3AQ14507 147 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CDK10Q15131 360 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 RAB35Q15286 201 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SSX2Q16385 188 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 PIGYQ3MUY2 71 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 C10orf128Q5T292 105 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DMKNQ6E0U4 476 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ASPHD2Q6ICH7 369 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 RPUSD3Q6P087 351 aaKnown RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 RPL22L1Q6P5R6 122 aaKnown RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 OR4M1Q8NGD0 313 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CCDC107Q8WV48 283 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 C22orf15Q8WYQ4 148 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SFXN3Q9BWM7 321 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 GON7Q9BXV9 100 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 HDHD2Q9H0R4 259 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 EVA1AQ9H8M9 152 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 TREM1Q9NP99 234 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SLC17A5Q9NRA2 495 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CKLFQ9UBR5 152 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 STUB1Q9UNE7 303 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 PLEKHA6Q9Y2H5 1048 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 IGKV1-9A0A0C4DH69 117 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 A0A1B0GUV1 79 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 A0A1B0GW55 424 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 OR6C6A6NF89 314 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SIRPB1O00241 398 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SERPINA3P01011 423 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SFTPBP07988 381 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SOD3P08294 240 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CST2P09228 141 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4L2P0CJ85 424 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4L3P0CJ86 424 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4L4P0CJ87 422 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4L5P0CJ88 424 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4L6P0CJ89 424 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4L7P0CJ90 424 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 COX5BP10606 129 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ZNF44P15621 663 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ZNF93P35789 620 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 OR3A3P47888 321 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 GABARAPL2P60520 117 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 FAM3AP98173 230 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 PRDX4Q13162 271 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 TNK1Q13470 666 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 GPR50Q13585 617 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 MOGAT2Q3SYC2 334 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 RIPPLY2Q5TAB7 128 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 UBE2UQ5VVX9 321 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CYB5R2Q6BCY4 276 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 FAM53AQ6NSI3 398 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 TEX38Q6PEX7 206 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4L9Q6RFH8 374 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 GLIPR1L1Q6UWM5 242 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 FAM131AQ6UXB0 335 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CATSPERDQ86XM0 798 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 OR8H3Q8N146 312 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 OR51F2Q8NH61 342 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 GRPEL2Q8TAA5 225 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 RFESDQ8TAC1 157 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 LRRC20Q8TCA0 184 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ITLN1Q8WWA0 313 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 NTNG2Q96CW9 530 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 HDHD3Q9BSH5 251 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ADAT1Q9BUB4 502 aaKnown RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SELENOIQ9C0D9 397 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ATG5Q9H1Y0 275 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SAV1Q9H4B6 383 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 NUDT15Q9NV35 164 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 NDUFB11Q9NX14 153 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 DUX4Q9UBX2 424 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 ZNF230Q9UIE0 474 aaPredicted RBP2.72□□□□□ -1.97
ZNF540-207ENST00000589285 CMAHPQ9Y471 501 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 SLC25A15Q9Y619 301 aa2.72□□□□□ -1.97
ZNF540-207ENST00000589285 IGKV1-27A0A075B6S5 117 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TRAV18A0A075B6X5 111 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 A0A0G2JMP0 313 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 A0A1B0GTI1 187 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 A0A1B0GUH1 482 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 LOC102725191A0A1B0GVB3 256 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM235A6NFC5 223 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms