RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 STAB1Q9NY15 2570 aa16.35■□□□□ 0.21
DDX39A-207ENST00000588542 RAB27BO00194 218 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 IGHV3-7P01780 117 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 RPS19P39019 145 aaKnown RBP16.34■□□□□ 0.21
DDX39A-207ENST00000588542 LOXL3P58215 753 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 OLFML2AQ68BL7 652 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 ZNF880Q6PDB4 577 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 TRAT1Q6PIZ9 186 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 SLC16A12Q6ZSM3 486 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 OR52M1Q8NGK5 317 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 ZNF596Q8TC21 504 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 SSX3Q99909 188 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 HDHD3Q9BSH5 251 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-207ENST00000588542 DPAGT1Q9H3H5 408 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 TAF9BQ9HBM6 251 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 PSG11Q9UQ72 335 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 KCNK7Q9Y2U2 307 aa16.34■□□□□ 0.21
DDX39A-207ENST00000588542 J3QR06 171 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 HBZP02008 142 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 HTR1DP28221 377 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 SSX2Q16385 188 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 AANATQ16613 207 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 HLA-DRB5Q30154 266 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 OR10R2Q8NGX6 335 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 OR9G1Q8NH87 305 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 OR1L1Q8NH94 360 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 LGALS14Q8TCE9 139 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 PIFOQ8TCI5 191 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 NAA50Q9GZZ1 169 aaKnown RBP16.33■□□□□ 0.2
DDX39A-207ENST00000588542 GFOD1Q9NXC2 390 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 ANK2Q01484 3957 aa16.33■□□□□ 0.2
DDX39A-207ENST00000588542 TRBV6-6A0A0A6YYG2 114 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 IGHV3-43A0A0B4J1X8 118 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 LY6LH3BQJ8 138 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 H3BUX3 64 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 SDCBPO00560 298 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-207ENST00000588542 TOR1AO14656 332 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 IGHV3-43DP0DP04 118 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 PRRX1P54821 245 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 NCS1P62166 190 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 FAM189A2Q15884 450 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 LRRC75BQ2VPJ9 315 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 IDNKQ5T6J7 187 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 ZNF554Q86TJ5 538 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 ANKRD13BQ86YJ7 626 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 NDNFQ8TB73 568 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 TAF15Q92804 592 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX39A-207ENST00000588542 RAB3CQ96E17 227 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 DPM3Q9P2X0 92 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 HILPDAQ9Y5L2 63 aa16.32■□□□□ 0.2
DDX39A-207ENST00000588542 METTL21EPA6NDL7 271 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 FAM181BA6NEQ2 426 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 VGLL3A8MV65 326 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 BUB1B-PAK6H3BSN5 160 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 SPINT2O43291 252 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 VBP1P61758 197 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 HMGN3Q15651 99 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 PLA1AQ53H76 456 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 PRR18Q8N4B5 295 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 OR5H6Q8NGV6 325 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 OR5R1Q8NH85 324 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 ATG5Q9H1Y0 275 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 MMP28Q9H239 520 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 RIMS4Q9H426 269 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-207ENST00000588542 VPREB3Q9UKI3 123 aa16.31■□□□□ 0.2
DDX39A-207ENST00000588542 TMEM89A2RUT3 159 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 MFNGO00587 321 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 GPR137BO60478 399 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 HKR1P10072 659 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 GNG10P50151 68 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 SCAND1P57086 179 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 ACTG1P63261 375 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 CHMP1AQ9HD42 196 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-207ENST00000588542 RAB9BQ9NP90 201 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 KCNIP1Q9NZI2 227 aa16.3■□□□□ 0.2
DDX39A-207ENST00000588542 A0A1W2PPE3 182 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 BTBD17A6NE02 478 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 LEUTXA8MZ59 168 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 TMEM127O75204 238 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 GABARAPO95166 117 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 HIST1H1DP16402 221 aaKnown RBP16.29■□□□□ 0.2
DDX39A-207ENST00000588542 GNB3P16520 340 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 RAB13P51153 203 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 CTF1Q16619 201 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 TMEM30BQ3MIR4 351 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 TPTE2P1Q5T6R2 138 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 GPR107Q5VW38 600 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 ZNF439Q8NDP4 499 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 SLC25A38Q96DW6 304 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 CMSS1Q9BQ75 279 aaKnown RBP16.29■□□□□ 0.2
DDX39A-207ENST00000588542 C12orf4Q9NQ89 552 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 RHBDL2Q9NX52 303 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 ETV7Q9Y603 341 aa16.29■□□□□ 0.2
DDX39A-207ENST00000588542 SERPINB10P48595 397 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 DYNLT3P51808 116 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 HTD2P86397 168 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 LY6EQ16553 131 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 Q3ZCU0 254 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 MOB1BQ7L9L4 216 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 GPR141Q7Z602 305 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms