RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ZNF418Q8TF45 676 aaPredicted RBP7.41□□□□□ -1.22
CIRBP-218ENST00000588344 MALSU1Q96EH3 234 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 KIRREL1Q96J84 757 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 JMJD8Q96S16 334 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 SUCNR1Q9BXA5 334 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 SLIRPQ9GZT3 109 aaKnown RBP7.41□□□□□ -1.22
CIRBP-218ENST00000588344 NXF2Q9GZY0 626 aaKnown RBP7.41□□□□□ -1.22
CIRBP-218ENST00000588344 MMP27Q9H306 513 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 GHITMQ9H3K2 345 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 AUNIPQ9H7T9 357 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 Q9N2K0 584 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 JPT1Q9UK76 154 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 FAM96BQ9Y3D0 163 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 TBL2Q9Y4P3 447 aaKnown RBP7.41□□□□□ -1.22
CIRBP-218ENST00000588344 MINOS1-NBL1R4GNA1 71 aa7.41□□□□□ -1.22
CIRBP-218ENST00000588344 ABCA1O95477 2261 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 SULT1C2O00338 296 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 SDCBPO00560 298 aaPredicted RBP7.4□□□□□ -1.22
CIRBP-218ENST00000588344 RGS5O15539 181 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 HPGDSO60760 199 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 FCGR3AP08637 254 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 IGHV4-38-2P0DP08 117 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 HOXB4P17483 251 aaPredicted RBP7.4□□□□□ -1.22
CIRBP-218ENST00000588344 ELK1P19419 428 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 NFYBP25208 207 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 HTR1DP28221 377 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 S100A5P33763 92 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 PRSS3P35030 304 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 CEACAM3P40198 252 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 HMGN3Q15651 99 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 PRAMEF5Q5TYX0 476 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 ZNF626Q68DY1 528 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 PNKDQ8N490 385 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 OR4A4PQ8NGN8 299 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 MCFD2Q8NI22 146 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 RFESDQ8TAC1 157 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 SETD6Q8TBK2 473 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 FAM216AQ8WUB2 273 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 OCSTAMPQ9BR26 566 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 PRDM13Q9H4Q3 707 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 ZMAT3Q9HA38 289 aaKnown RBP7.4□□□□□ -1.22
CIRBP-218ENST00000588344 SCPEP1Q9HB40 452 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 ZNF286AQ9HBT8 521 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 OR2S2Q9NQN1 319 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 GFOD1Q9NXC2 390 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 GNG12Q9UBI6 72 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 ZNF69Q9UC07 566 aa7.4□□□□□ -1.22
CIRBP-218ENST00000588344 AMMECR1Q9Y4X0 333 aaPredicted RBP7.4□□□□□ -1.22
CIRBP-218ENST00000588344 CR1P17927 2039 aa7.4□□□□□ -1.23
CIRBP-218ENST00000588344 MED13LQ71F56 2210 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 IGHV2-26A0A0B4J1V2 119 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 TRAV39A0A0B4J263 110 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 MEX3AA1L020 520 aaKnown RBP7.39□□□□□ -1.23
CIRBP-218ENST00000588344 MEIOCA2RUB1 952 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 TMEM235A6NFC5 223 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 A6NHS1 94 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 LEUTXA8MZ59 168 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 OOSP1A8MZH6 123 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 J3QR06 171 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 ITGB1BP1O14713 200 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 HSPA12AO43301 675 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 YPEL1O60688 119 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 IGLV1-47P01700 117 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 ARG1P05089 322 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 EIF4EP06730 217 aaKnown RBP7.39□□□□□ -1.23
CIRBP-218ENST00000588344 LPLP06858 475 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 FBP1P09467 338 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 OMGP23515 440 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 ZBTB25P24278 435 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 SSTR5P35346 364 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 ARHGDIBP52566 201 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 LOXL3P58215 753 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 TAS2R20P59543 309 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 HLA-DRB3P79483 266 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 MRPS10P82664 201 aaKnown RBP7.39□□□□□ -1.23
CIRBP-218ENST00000588344 AANATQ16613 207 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 OLFML2AQ68BL7 652 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 HCP5Q6MZN7 132 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 CCDC144NLQ6NUI1 221 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 ZNF782Q6ZMW2 699 aaPredicted RBP7.39□□□□□ -1.23
CIRBP-218ENST00000588344 IL17RELQ6ZVW7 336 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 PRR18Q8N4B5 295 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 LINC00311Q8N616 119 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 YPEL2Q96QA6 119 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 ST6GALNAC5Q9BVH7 336 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 C6orf62Q9GZU0 229 aaPredicted RBP7.39□□□□□ -1.23
CIRBP-218ENST00000588344 MEGF9Q9H1U4 602 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 DPM3Q9P2X0 92 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 PSG11Q9UQ72 335 aa7.39□□□□□ -1.23
CIRBP-218ENST00000588344 MRPS7Q9Y2R9 242 aaKnown RBP7.39□□□□□ -1.23
CIRBP-218ENST00000588344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.38□□□□□ -1.232e-14■■■■□ 25.3
CIRBP-218ENST00000588344 ODF3BA8MYP8 253 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 BUB1B-PAK6H3BSN5 160 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 CTDSP2O14595 271 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 FABP7O15540 132 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 MMP23AO75900 390 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 HLA-DQB1P01920 261 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 COX7A1P24310 79 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 IL3RAP26951 378 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 SAA4P35542 130 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms