RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 OR4K15Q8NH41 348 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 ETAA1Q9NY74 926 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 RCC2Q9P258 522 aaKnown RBP11.31□□□□□ -0.6
VMP1-206ENST00000587945 TRAPPC2LQ9UL33 140 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 MCRIP1C9JLW8 97 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 GNAO1P09471 354 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 FSTP19883 344 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 THBS3P49746 956 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 MED21Q13503 144 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 GPR176Q14439 515 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 AWAT2Q6E213 333 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 RAB12Q6IQ22 244 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 LCNL1Q6ZST4 164 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 C5orf24Q7Z6I8 188 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 IZUMO1Q8IYV9 350 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 STPG2Q8N412 459 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 PRR18Q8N4B5 295 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 DHRSXQ8N5I4 330 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 Q8N6K4 173 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 Q8N9W7 124 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 SETD9Q8NE22 299 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 OR51D1Q8NGF3 324 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 OR2T10Q8NGZ9 312 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 OR1L1Q8NH94 360 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 RTN4IP1Q8WWV3 396 aaPredicted RBP11.3□□□□□ -0.6
VMP1-206ENST00000587945 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 SELENOIQ9C0D9 397 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 GNG12Q9UBI6 72 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 PEX16Q9Y5Y5 336 aa11.3□□□□□ -0.6
VMP1-206ENST00000587945 DUS4LO95620 317 aaKnown RBP11.29□□□□□ -0.6
VMP1-206ENST00000587945 HBZP02008 142 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 RCC1P18754 421 aaPredicted RBP11.29□□□□□ -0.6
VMP1-206ENST00000587945 CELP19835 753 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 IL3RAP26951 378 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 GPR12P47775 334 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 ZNF134P52741 427 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 SLC35B1P78383 322 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 CT45A1Q5HYN5 189 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 TGIF2LXQ8IUE1 241 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 C8orf31Q8N9H6 132 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 ZNF439Q8NDP4 499 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 CT45A3Q8NHU0 189 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 DERL3Q96Q80 235 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 ABCG5Q9H222 651 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 SPACA1Q9HBV2 294 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 PLSCR3Q9NRY6 295 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 ZFP57Q9NU63 452 aa11.29□□□□□ -0.6
VMP1-206ENST00000587945 UBE2QL1A1L167 161 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 EFCAB10A6NFE3 127 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 SPINT2O43291 252 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 CRTAPO75718 401 aaPredicted RBP11.28□□□□□ -0.6
VMP1-206ENST00000587945 MOSP00540 346 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 RPLP1P05386 114 aaKnown RBP11.28□□□□□ -0.6
VMP1-206ENST00000587945 MGMTP16455 207 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 CD1BP29016 333 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 F2RL1P55085 397 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 TAS2R43P59537 309 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 EGFEM1PQ0D2K5 195 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 RCN1Q15293 331 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 SIGIRRQ6IA17 410 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 SLC25A48Q6ZT89 311 aaKnown RBP11.28□□□□□ -0.6
VMP1-206ENST00000587945 AHSA2Q719I0 299 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 LYPD6Q86Y78 171 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 PACRGLQ8N7B6 248 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 FAM46BQ96A09 425 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 MRPS24Q96EL2 167 aaKnown RBP11.28□□□□□ -0.6
VMP1-206ENST00000587945 S1PR3Q99500 378 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 P2RX4Q99571 388 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 PSORS1C1Q9UIG5 152 aa11.28□□□□□ -0.6
VMP1-206ENST00000587945 AP4M1O00189 453 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 CAPGP40121 348 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 MYCNOSP40205 109 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 INSL4Q14641 139 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 GNMTQ14749 295 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 C6orf183Q5T699 404 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 TEX38Q6PEX7 206 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 ZNF695Q8IW36 515 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 GAPTQ8N292 157 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 COMMD1Q8N668 190 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 BPIFB6Q8NFQ5 453 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 TFAP2CQ92754 450 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 RAX2Q96IS3 184 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 Q96M66 194 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 TAF9BQ9HBM6 251 aa11.27□□□□□ -0.61
VMP1-206ENST00000587945 LIN7CQ9NUP9 197 aaKnown RBP11.27□□□□□ -0.61
VMP1-206ENST00000587945 CNOT2Q9NZN8 540 aaKnown RBP11.27□□□□□ -0.61
VMP1-206ENST00000587945 MYL12BO14950 172 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 FUT3P21217 361 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 ZNF137PP52743 207 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 WNT4P56705 351 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 RAB25P57735 213 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 PNLIPRP3Q17RR3 467 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms