RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 THAP7Q9BT49 309 aaPredicted RBP15.05■□□□□ -0
RFFL-211ENST00000584541 LINC00574Q9H8X3 128 aa15.05■□□□□ -0
RFFL-211ENST00000584541 TAS2R8Q9NYW2 309 aa15.05■□□□□ -0
RFFL-211ENST00000584541 KLK11Q9UBX7 282 aa15.05■□□□□ -0
RFFL-211ENST00000584541 ANXA10Q9UJ72 324 aa15.05■□□□□ -0
RFFL-211ENST00000584541 ANAPC10Q9UM13 185 aa15.05■□□□□ -0
RFFL-211ENST00000584541 CSMD1Q96PZ7 3565 aa15.04■□□□□ -0
RFFL-211ENST00000584541 J3QLI3 93 aa15.04■□□□□ -0
RFFL-211ENST00000584541 TOX4O94842 621 aa15.04■□□□□ -0
RFFL-211ENST00000584541 INHBBP09529 407 aa15.04■□□□□ -0
RFFL-211ENST00000584541 CSF1P09603 554 aa15.04■□□□□ -0
RFFL-211ENST00000584541 SCTP09683 121 aa15.04■□□□□ -0
RFFL-211ENST00000584541 GSTT2P0CG29 244 aa15.04■□□□□ -0
RFFL-211ENST00000584541 GSTT2BP0CG30 244 aa15.04■□□□□ -0
RFFL-211ENST00000584541 NAT1P18440 290 aa15.04■□□□□ -0
RFFL-211ENST00000584541 OMGP23515 440 aa15.04■□□□□ -0
RFFL-211ENST00000584541 FPR2P25090 351 aa15.04■□□□□ -0
RFFL-211ENST00000584541 CD40LGP29965 261 aa15.04■□□□□ -0
RFFL-211ENST00000584541 INPP1P49441 399 aa15.04■□□□□ -0
RFFL-211ENST00000584541 PPP5CP53041 499 aa15.04■□□□□ -0
RFFL-211ENST00000584541 TAS2R46P59540 309 aa15.04■□□□□ -0
RFFL-211ENST00000584541 ERVFRD-1P60508 538 aa15.04■□□□□ -0
RFFL-211ENST00000584541 PAX8Q06710 450 aa15.04■□□□□ -0
RFFL-211ENST00000584541 LTC4SQ16873 150 aa15.04■□□□□ -0
RFFL-211ENST00000584541 PRAMEF5Q5TYX0 476 aa15.04■□□□□ -0
RFFL-211ENST00000584541 TRIQKQ629K1 86 aa15.04■□□□□ -0
RFFL-211ENST00000584541 FAHD2BQ6P2I3 314 aaPredicted RBP15.04■□□□□ -0
RFFL-211ENST00000584541 OR1L1Q8NH94 360 aa15.04■□□□□ -0
RFFL-211ENST00000584541 UBALD1Q8TB05 177 aa15.04■□□□□ -0
RFFL-211ENST00000584541 FAHD2AQ96GK7 314 aa15.04■□□□□ -0
RFFL-211ENST00000584541 KIRREL1Q96J84 757 aa15.04■□□□□ -0
RFFL-211ENST00000584541 METTL8Q9H825 291 aaKnown RBP15.04■□□□□ -0
RFFL-211ENST00000584541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.04■□□□□ -02e-6■■□□□ 14.5
RFFL-211ENST00000584541 F2RL2O00254 374 aa15.03■□□□□ -0
RFFL-211ENST00000584541 SDCBPO00560 298 aaPredicted RBP15.03■□□□□ -0
RFFL-211ENST00000584541 CTXN2P0C2S0 81 aa15.03■□□□□ -0
RFFL-211ENST00000584541 IGHV1-8P0DP01 117 aa15.03■□□□□ -0
RFFL-211ENST00000584541 CD99P14209 185 aa15.03■□□□□ -0
RFFL-211ENST00000584541 NFYBP25208 207 aa15.03■□□□□ -0
RFFL-211ENST00000584541 GDNFP39905 211 aa15.03■□□□□ -0
RFFL-211ENST00000584541 OR3A3P47888 321 aa15.03■□□□□ -0
RFFL-211ENST00000584541 TAS2R19P59542 299 aa15.03■□□□□ -0
RFFL-211ENST00000584541 HTD2P86397 168 aa15.03■□□□□ -0
RFFL-211ENST00000584541 STEAP3Q658P3 488 aa15.03■□□□□ -0
RFFL-211ENST00000584541 OR5AP2Q8NGF4 316 aa15.03■□□□□ -0
RFFL-211ENST00000584541 PCGF1Q9BSM1 259 aa15.03■□□□□ -0
RFFL-211ENST00000584541 CCDC32Q9BV29 185 aa15.03■□□□□ -0
RFFL-211ENST00000584541 SIRPDQ9H106 197 aa15.03■□□□□ -0
RFFL-211ENST00000584541 C7orf69Q9H7B7 122 aa15.03■□□□□ -0
RFFL-211ENST00000584541 ZNF107Q9UII5 783 aaPredicted RBP15.03■□□□□ -0
RFFL-211ENST00000584541 KCNS2Q9ULS6 477 aa15.03■□□□□ -0
RFFL-211ENST00000584541 RBMX2Q9Y388 322 aaKnown RBP15.03■□□□□ -0
RFFL-211ENST00000584541 AUP1Q9Y679 476 aa15.03■□□□□ -0
RFFL-211ENST00000584541 SESN1Q9Y6P5 492 aa15.03■□□□□ -0
RFFL-211ENST00000584541 VPS13CQ709C8 3753 aa15.03■□□□□ -0
RFFL-211ENST00000584541 ITPR3Q14573 2671 aa15.03■□□□□ -0
RFFL-211ENST00000584541 MED13LQ71F56 2210 aa15.02■□□□□ -0
RFFL-211ENST00000584541 IGKV1D-8A0A087WSZ0 117 aa15.02■□□□□ -0
RFFL-211ENST00000584541 ZNF736B4DX44 427 aaPredicted RBP15.02■□□□□ -0
RFFL-211ENST00000584541 HSPA12AO43301 675 aa15.02■□□□□ -0
RFFL-211ENST00000584541 CD5LO43866 347 aa15.02■□□□□ -0
RFFL-211ENST00000584541 DIRAS3O95661 229 aa15.02■□□□□ -0
RFFL-211ENST00000584541 FOSL1P15407 271 aa15.02■□□□□ -0
RFFL-211ENST00000584541 PRTN3P24158 256 aa15.02■□□□□ -0
RFFL-211ENST00000584541 ZBTB25P24278 435 aa15.02■□□□□ -0
RFFL-211ENST00000584541 AP3S2P59780 193 aa15.02■□□□□ -0
RFFL-211ENST00000584541 ACTBL2Q562R1 376 aa15.02■□□□□ -0
RFFL-211ENST00000584541 VMO1Q7Z5L0 202 aa15.02■□□□□ -0
RFFL-211ENST00000584541 C11orf42Q8N5U0 333 aa15.02■□□□□ -0
RFFL-211ENST00000584541 Q8N7P7 452 aa15.02■□□□□ -0
RFFL-211ENST00000584541 TMEM229BQ8NBD8 167 aa15.02■□□□□ -0
RFFL-211ENST00000584541 OR52M1Q8NGK5 317 aa15.02■□□□□ -0
RFFL-211ENST00000584541 OR5H2Q8NGV7 314 aa15.02■□□□□ -0
RFFL-211ENST00000584541 OR10J5Q8NHC4 309 aa15.02■□□□□ -0
RFFL-211ENST00000584541 SNAPC3Q92966 411 aa15.02■□□□□ -0
RFFL-211ENST00000584541 OR2S2Q9NQN1 319 aa15.02■□□□□ -0
RFFL-211ENST00000584541 NECAP2Q9NVZ3 263 aa15.02■□□□□ -0
RFFL-211ENST00000584541 GNG12Q9UBI6 72 aa15.02■□□□□ -0
RFFL-211ENST00000584541 JPT1Q9UK76 154 aa15.02■□□□□ -0
RFFL-211ENST00000584541 WNK2Q9Y3S1 2297 aa15.02□□□□□ -0.01
RFFL-211ENST00000584541 BET1O15155 118 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 RGS11O94810 467 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 TBPP20226 339 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 HLA-DMAP28067 261 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 CDK10Q15131 360 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 IGSF11Q5DX21 431 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 NCR3LG1Q68D85 454 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 ZNF782Q6ZMW2 699 aaPredicted RBP15.01□□□□□ -0.01
RFFL-211ENST00000584541 C5orf24Q7Z6I8 188 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 GINS4Q9BRT9 223 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 CABLES2Q9BTV7 478 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 TMUB1Q9BVT8 246 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 HEXA-AS1Q9H8Q6 139 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 SIRT7Q9NRC8 400 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 SLC23A1Q9UHI7 598 aa15.01□□□□□ -0.01
RFFL-211ENST00000584541 MMP23AO75900 390 aa15□□□□□ -0.01
RFFL-211ENST00000584541 MMP9P14780 707 aa15□□□□□ -0.01
RFFL-211ENST00000584541 BAK1Q16611 211 aa15□□□□□ -0.01
RFFL-211ENST00000584541 RNASE10Q5GAN6 216 aaKnown RBP15□□□□□ -0.01
RFFL-211ENST00000584541 ZNF57Q68EA5 555 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms