RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 SNAP29O95721 258 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 EPPINO95925 133 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 FBP1P09467 338 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 SPAM1P38567 509 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 PSMD8P48556 350 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 RAB2AP61019 212 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 UBE2KP61086 200 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 EXOC3L4Q17RC7 722 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 TMEM176BQ3YBM2 270 aaPredicted RBP1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 NIPAL1Q6NVV3 410 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 FAM19A3Q7Z5A8 133 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 ZFAND2AQ8N6M9 145 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 DNAAF3Q8N9W5 541 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 OR4C16Q8NGL9 310 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 OR9I1Q8NGQ6 314 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 MFSD8Q8NHS3 518 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 PDCD6IPQ8WUM4 868 aaKnown RBP1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 OR51E2Q9H255 320 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 AGPAT3Q9NRZ7 376 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 TAS2R13Q9NYV9 303 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 COL4A2P08572 1712 aa1.52□□□□□ -2.17
PPP4R1-227ENST00000583988 BAHCC1Q9P281 2608 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 C17orf98A8MV24 154 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 YKT6O15498 198 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 CTSEP14091 401 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 LCN1P31025 176 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 COILP38432 576 aaPredicted RBP1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 OR10A3P58181 314 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 DEFB103AP81534 67 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 ZBTB6Q15916 424 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 SDIM1Q6ZPB5 146 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 COPS6Q7L5N1 327 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 ZBTB8OSQ8IWT0 167 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 MSRB3Q8IXL7 192 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 C17orf78Q8N4C9 275 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 C11orf49Q9H6J7 331 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 MYO9BQ13459 2157 aa1.51□□□□□ -2.17
PPP4R1-227ENST00000583988 PTPRJQ12913 1337 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 POLR3GO15318 223 aaPredicted RBP1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 SYNGR1O43759 233 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 SLC35E2BP0CK96 405 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 RCVRNP35243 200 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 GTF2BQ00403 316 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 SYCP1Q15431 976 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 RBM48Q5RL73 367 aaKnown RBP1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 VN1R4Q7Z5H5 301 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 OR5K1Q8NHB7 308 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 SLC19A3Q9BZV2 496 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 AICDAQ9GZX7 198 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 CXCL16Q9H2A7 254 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 OR52A5Q9H2C5 316 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 UBQLN4Q9NRR5 601 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 DMAC2Q9NW81 257 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 TMEM216Q9P0N5 145 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 FBXL3Q9UKT7 428 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 SCML1Q9UN30 329 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 CCL26Q9Y258 94 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 POFUT2Q9Y2G5 429 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 WASHC3Q9Y3C0 194 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 OTOFQ9HC10 1997 aa1.5□□□□□ -2.17
PPP4R1-227ENST00000583988 MAP3K19Q56UN5 1328 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 ZNF638Q14966 1978 aaKnown RBP1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 IGKV1-12A0A0C4DH73 117 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 LOC102725191A0A1B0GVB3 256 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 ODF3BA8MYP8 253 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 EFCAB9A8MZ26 197 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 K7ERQ8 282 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 NEMFO60524 1076 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 IGKV1D-12P01611 117 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 IGHV3-30-3P0DP02 117 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 BLVRBP30043 206 aaPredicted RBP1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 CASQ1P31415 396 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 HADHBP55084 474 aaKnown RBP1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 FAM3AP98173 230 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 RAB31Q13636 194 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 ANGPT1Q15389 498 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 KRTAP21-3Q3LHN1 58 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 OR10J3Q5JRS4 329 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 HENMT1Q5T8I9 393 aaKnown RBP1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 TCF23Q7RTU1 214 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 TCAIMQ8N3R3 496 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 OR5D18Q8NGL1 313 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 OR4P4Q8NGL7 312 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 CAPZA3Q96KX2 299 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 DNAJC30Q96LL9 226 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 SMDT1Q9H4I9 107 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 FIS1Q9Y3D6 152 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 HEY1Q9Y5J3 304 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 ADAMTSL1Q8N6G6 1762 aa1.49□□□□□ -2.17
PPP4R1-227ENST00000583988 GOLGA8QA0A0J9YX86 632 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 KNCNA6PVL3 124 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 GPR171O14626 319 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 TOR1AO14656 332 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 LIN7AO14910 233 aaPredicted RBP1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 OR4A8P0C604 315 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 LIMS3P0CW19 117 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 LIMS4P0CW20 117 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 CD99P14209 185 aa1.48□□□□□ -2.17
PPP4R1-227ENST00000583988 NQO1P15559 274 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms