RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 C12orf4Q9NQ89 552 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 MMP26Q9NRE1 261 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 C19orf12Q9NSK7 152 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 MCUBQ9NWR8 336 aa9.05□□□□□ -0.96
TOP3A-216ENST00000583804 RPUSD1Q9UJJ7 312 aaKnown RBP9.05□□□□□ -0.96
TOP3A-216ENST00000583804 MED13LQ71F56 2210 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 MEIKINA0A087WXM9 373 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 TRBV23-1A0A0A0MS06 115 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 PPIAL4CA0A0B4J2A2 164 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 TMEM30CPA0ZSE6 113 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 ODAMA1E959 279 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 A8MXK9 166 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 CD3DP04234 171 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 TCRBP04435 133 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 MELTFP08582 738 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 PPIAL4GP0DN37 164 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 RCC1P18754 421 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-216ENST00000583804 RCVRNP35243 200 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 GLP1RP43220 463 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 CD83Q01151 205 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 MRGPRDQ8TDS7 321 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 SNAPC3Q92966 411 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 TINAGL1Q9GZM7 467 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-216ENST00000583804 SCPEP1Q9HB40 452 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 HIF1ANQ9NWT6 349 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 MTFP1Q9UDX5 166 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 TRAPPC2LQ9UL33 140 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 RBMX2Q9Y388 322 aaKnown RBP9.04□□□□□ -0.96
TOP3A-216ENST00000583804 MALRD1Q5VYJ5 2156 aa9.04□□□□□ -0.96
TOP3A-216ENST00000583804 TRAV20A0A0B4J274 112 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 IGHV2-70DA0A0C4DH43 119 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 hADV38S2A0JD32 116 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ENSAO43768 121 aaKnown RBP9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ZNF16P17020 682 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-216ENST00000583804 HRH1P35367 487 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 AP3S2P59780 193 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ARPC4P59998 168 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ACTBP60709 375 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ACTG1P63261 375 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 MEF2CQ06413 473 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-216ENST00000583804 TMEM200BQ69YZ2 307 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 SLC35E4Q6ICL7 350 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 BTNL3Q6UXE8 466 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ZNF497Q6ZNH5 498 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ZNF565Q8N9K5 539 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 BEST4Q8NFU0 473 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 OR4C16Q8NGL9 310 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 OR56B4Q8NH76 319 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 GRPEL2Q8TAA5 225 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 TMEM186Q96B77 213 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 TMUB1Q9BVT8 246 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.03□□□□□ -0.96
TOP3A-216ENST00000583804 ONECUT1Q9UBC0 465 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 LPAR3Q9UBY5 353 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 OTOGQ6ZRI0 2925 aa9.03□□□□□ -0.96
TOP3A-216ENST00000583804 AKAP9Q99996 3911 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 TRGV10A0A0A0MS01 117 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 KIR2DS1A0A191URI9 304 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 ANKRD20A5PA0PJZ0 165 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 ZNF736B4DX44 427 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-216ENST00000583804 SULT1C2O00338 296 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 PRAF2O60831 178 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 CA11O75493 328 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 RAB3DO95716 219 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 LIPFP07098 398 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 SCTP09683 121 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 CCR6P51684 374 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 DVL1P1P54792 670 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-216ENST00000583804 ARF6P62330 175 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 ZNF273Q14593 569 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 ARL6IP1Q15041 203 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 DCAF12L2Q5VW00 463 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 FAM53AQ6NSI3 398 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-216ENST00000583804 FAHD2BQ6P2I3 314 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-216ENST00000583804 HOGA1Q86XE5 327 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 LY6G5BQ8NDX9 201 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 OR13A1Q8NGR1 328 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 OR5H2Q8NGV7 314 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 FAHD2AQ96GK7 314 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 HYLS1Q96M11 299 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 MED28Q9H204 178 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 HRASLSQ9HDD0 168 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 Q9N2K0 584 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 OR6C3Q9NZP0 311 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 POLR3KQ9Y2Y1 108 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-216ENST00000583804 INSIG2Q9Y5U4 225 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 CR1P17927 2039 aa9.02□□□□□ -0.96
TOP3A-216ENST00000583804 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.97
TOP3A-216ENST00000583804 A0A0A6YYJ9 748 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 A0A1W2PPH5 198 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 BET1O15155 118 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 AMY2AP04746 511 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 CSF1P09603 554 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 FOSL1P15407 271 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 CCL3L1P16619 93 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 SSTR5P35346 364 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 TAS2R19P59542 299 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 PAX2Q02962 417 aa9.02□□□□□ -0.97
TOP3A-216ENST00000583804 CHRFAM7AQ494W8 412 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms