RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 WARS2Q9UGM6 360 aaKnown RBP6.12□□□□□ -1.43
SMCHD1-210ENST00000583800 AMMECR1Q9Y4X0 333 aaPredicted RBP6.12□□□□□ -1.43
SMCHD1-210ENST00000583800 KBTBD11-OT1A0A1B0GTJ5 212 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 A0A1W2PPE3 182 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 C3orf84H3BNL1 204 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 J3QR06 171 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 CCL24O00175 119 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 RAMP3O60896 148 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 IGHG2P01859 326 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 OCM2P0CE71 109 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 OCMP0CE72 109 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 CGB3P0DN86 165 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 CGB7P0DN87 165 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 HOXB6P17509 224 aaKnown RBP6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 HTR1FP30939 366 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 ALDH3A2P51648 485 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 NANOS3P60323 173 aaKnown RBP6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 BNIP1Q12981 228 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 CDK5R1Q15078 307 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 TMEM244Q5VVB8 128 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 FOXRED2Q8IWF2 684 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 COMMD1Q8N668 190 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 ARL6IP6Q8N6S5 226 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 CHST4Q8NCG5 386 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 OR51A4Q8NGJ6 313 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 OR2G2Q8NGZ5 317 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 MBOAT4Q96T53 435 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 DCLRE1BQ9H816 532 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 IDI2-AS1Q9NZ38 188 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 OR6C3Q9NZP0 311 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 ZMAT5Q9UDW3 170 aaKnown RBP6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 KIF25Q9UIL4 384 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 PSG11Q9UQ72 335 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 STARD9Q9P2P6 4700 aa6.11□□□□□ -1.43
SMCHD1-210ENST00000583800 MEIKINA0A087WXM9 373 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 IGHV3-72A0A0B4J1Y9 119 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 TRAV39A0A0B4J263 110 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 H0YJX3 145 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 HSD17B6O14756 317 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 DEGS1O15121 323 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 IL1AP01583 271 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 PPIFP30405 207 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 SSTR5P35346 364 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 POLR2IP36954 125 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 GPR12P47775 334 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 REG1BP48304 166 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 PCP4P48539 62 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 ZP1P60852 638 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 MADCAM1Q13477 382 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 PAN3Q58A45 887 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 C9orf66Q5T8R8 295 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 KDM4DQ6B0I6 523 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 TEX38Q6PEX7 206 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 POC5Q8NA72 575 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 OR51T1Q8NGJ9 327 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 OR5M8Q8NGP6 311 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 OR13C3Q8NGS6 347 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 OR8U1Q8NH10 309 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 RFESDQ8TAC1 157 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 PLPPR1Q8TBJ4 325 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 MRGPRDQ8TDS7 321 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 RBMXL1Q96E39 390 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 ABHD1Q96SE0 405 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 MYCBPQ99417 103 aaPredicted RBP6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 OSBPL10Q9BXB5 764 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 POMPQ9Y244 141 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 MYRFQ9Y2G1 1151 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 HYDINQ4G0P3 5121 aa6.1□□□□□ -1.43
SMCHD1-210ENST00000583800 TENM2Q9NT68 2774 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 TRAV24A0A0B4J272 114 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 IGHV1-3A0A0C4DH29 117 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 NCBP2LA6PVI3 153 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 SEC14L6B5MCN3 397 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 G3V2T6 193 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 AP4M1O00189 453 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 ATP8B1O43520 1251 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 ZFPL1O95159 310 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 MT-ND2P03891 347 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 ISG15P05161 165 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 HCKP08631 526 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 HTR1AP08908 422 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 TMEM225BP0DP42 221 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 RAB7AP51149 207 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 TIRAPP58753 221 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 GPR50Q13585 617 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 ATP6AP1Q15904 470 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 ZSCAN26Q16670 478 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 PNLIPRP3Q17RR3 467 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 CXorf66Q5JRM2 361 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 RSBN1Q5VWQ0 802 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 LPCAT4Q643R3 524 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 MOB3BQ86TA1 216 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 SAXO1Q8IYX7 474 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 Q8N9W7 124 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 CCDC197Q8NCU1 140 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 OR10X1Q8NGY0 326 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 HAVCR2Q8TDQ0 301 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 NPIPB3Q92617 1050 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 EME1Q96AY2 570 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 CIB1Q99828 191 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms