RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 SS18L1O75177 396 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 MRPL33O75394 65 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 SULT1C4O75897 302 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TGM6O95932 706 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 PRB2P02812 416 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TACSTD2P09758 323 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 H2BFMP0C1H6 154 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 PSMA1P25786 263 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 HSD11B1P28845 292 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 UGT2B10P36537 528 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 GUCA1AP43080 201 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 KIR3DL2P43630 455 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TGM4P49221 684 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 LSM6P62312 80 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 FABP5Q01469 135 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 MRPL28Q13084 256 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 INSL4Q14641 139 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TRAM1Q15629 374 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 CEACAM16Q2WEN9 425 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 CCDC58Q4VC31 144 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 C1QTNF12Q5T7M4 302 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 C1orf185Q5T7R7 199 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 RIPPLY2Q5TAB7 128 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TSPO2Q5TGU0 170 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 C9orf135Q5VTT2 229 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 LIPNQ5VXI9 398 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 C22orf42Q6IC83 251 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 RPL22L1Q6P5R6 122 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 CD200R1LQ6Q8B3 271 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TMEM91Q6ZNR0 172 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 HSD17B13Q7Z5P4 300 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 ZNF100Q8IYN0 542 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 ZNF679Q8IYX0 411 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 GCNT2Q8N0V5 402 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 LRRC18Q8N456 261 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 BPIFB2Q8N4F0 458 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 DYNC2LI1Q8TCX1 351 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 RPS4Y2Q8TD47 263 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 HAVCR2Q8TDQ0 301 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 RNF133Q8WVZ7 376 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 IL1F10Q8WWZ1 152 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 APH1AQ96BI3 265 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 SLAMF6Q96DU3 332 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 SMIM19Q96E16 107 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 PGLYRP3Q96LB9 341 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 ATP6V0BQ99437 205 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TSC22D3Q99576 134 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 ZNF416Q9BWM5 594 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 LINC00470Q9BZP3 86 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 C1orf198Q9H425 327 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 ELOVL3Q9HB03 270 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 CRLF2Q9HC73 371 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 TXNL4BQ9NX01 149 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 CCDC59Q9P031 241 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 CYB5R1Q9UHQ9 305 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 FBXL3Q9UKT7 428 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 LHFPL6Q9Y693 200 aa3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 RIF1Q5UIP0 2472 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 ANKRD17O75179 2603 aaKnown RBP3.35□□□□□ -1.87
TRAPPC8-209ENST00000582509 MED12LQ86YW9 2145 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 DNAJC13O75165 2243 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 TRDV1A0A1B0GX56 115 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 OR6C65A6NJZ3 312 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 TMEM212A6NML5 194 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 OR4C45A6NMZ5 311 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 LOC110117498-PIK3R3F6TDL0 507 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 H3BSH0 61 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 RPL36A-HNRNPH2H7BZ11 118 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 CASKO14936 926 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 RER1O15258 196 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 SSX5O60225 188 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 ZNF254O75437 659 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 CDRT1O95170 752 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 FARS2O95363 451 aaKnown RBP3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 SERPINA3P01011 423 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 HLA-DPB1P04440 258 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 CST2P09228 141 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 GABRA1P14867 456 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 ABOP16442 354 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 NPR2P20594 1047 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 GALP22466 123 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 MYL9P24844 172 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 FGF9P31371 208 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 TDGF1P3P51864 188 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 SH3BGRP55822 239 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 GRB2P62993 217 aaKnown RBP3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 MXD1Q05195 221 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 STK11Q15831 433 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 DGUOKQ16854 277 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 ZNF829Q3KNS6 432 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 ACSM3Q53FZ2 586 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 CCDC92Q53HC0 331 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 FAM27D1Q5T7N8 215 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 DEGS2Q6QHC5 323 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 STAC2Q6ZMT1 411 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 SLC16A14Q7RTX9 510 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 ABHD12BQ7Z5M8 362 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 EGFL6Q8IUX8 553 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 UBE2J2Q8N2K1 259 aa3.34□□□□□ -1.87
TRAPPC8-209ENST00000582509 MS4A15Q8N5U1 240 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms