RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 DDIT4LQ96D03 193 aa1.64□□□□□ -2.15
SMCHD1-204ENST00000581226 LRRC19Q9H756 370 aa1.64□□□□□ -2.15
SMCHD1-204ENST00000581226 ADAMTSL1Q8N6G6 1762 aa1.64□□□□□ -2.15
SMCHD1-204ENST00000581226 COL11A1P12107 1806 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 COL18A1P39060 1754 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 TRGV4A0A0C4DH28 118 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 I3L4J1 428 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 SYNGR1O43759 233 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 LTAP01374 205 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 KDELR2P33947 212 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 CD151P48509 253 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 MP68P56378 58 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 RAB25P57735 213 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 DYNLL1P63167 89 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 XKRXQ6PP77 449 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 SSX7Q7RTT5 188 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 C10orf107Q8IVU9 208 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 IFT81Q8WYA0 676 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 CMBLQ96DG6 245 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 TMEM56Q96MV1 263 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 APOL4Q9BPW4 351 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 SLC19A3Q9BZV2 496 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 CRCT1Q9UGL9 99 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 FBXL3Q9UKT7 428 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 CEP170Q5SW79 1584 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 VWDEQ8N2E2 1590 aa1.63□□□□□ -2.15
SMCHD1-204ENST00000581226 CACNA1GO43497 2377 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 OTOFQ9HC10 1997 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 CRTAPO75718 401 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 P0DMU3 169 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 FAM231AP0DMU4 169 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 FAM231CP0DMU5 169 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 PSMD7P51665 324 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 RAB2AP61019 212 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 FAM3AP98173 230 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 SYCP1Q15431 976 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 RBM48Q5RL73 367 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 SCXQ7RTU7 201 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 YIPF7Q8N8F6 280 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 OR11G2Q8NGC1 345 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 OR11L1Q8NGX0 322 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 OR2V1Q8NHB1 315 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 ZNRF2Q8NHG8 242 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 DYNC2LI1Q8TCX1 351 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 CLDN23Q96B33 292 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 ATP6V1G3Q96LB4 118 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 ZNF286AQ9HBT8 521 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 ASCL3Q9NQ33 180 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 EURLQ9NYK6 297 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 CHMP5Q9NZZ3 219 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 CD300AQ9UGN4 299 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 CFAP45Q9UL16 551 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 PHLDA3Q9Y5J5 127 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 MTCH2Q9Y6C9 303 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 MAP3K19Q56UN5 1328 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 ARHGAP32A7KAX9 2087 aa1.62□□□□□ -2.15
SMCHD1-204ENST00000581226 MYO9BQ13459 2157 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 DSCAMO60469 2012 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 TRPC5OSA6NMA1 111 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 KLRC4-KLRK1H3BQV0 150 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 SH2D1AO60880 128 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 GUSBP08236 651 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 PSMB6P28072 239 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 CASQ1P31415 396 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 PYCR1P32322 319 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 INPP1P49441 399 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 PSG4Q00888 419 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 C10orf91Q5T1B1 145 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 NIPAL1Q6NVV3 410 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 OLIG3Q7RTU3 272 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 VN1R4Q7Z5H5 301 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 FER1L6-AS1Q8NA97 138 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 CASTOR1Q8WTX7 329 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 CHST5Q9GZS9 411 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 RPUSD1Q9UJJ7 312 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 GMEB1Q9Y692 573 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 BAHCC1Q9P281 2608 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 CHD5Q8TDI0 1954 aa1.61□□□□□ -2.15
SMCHD1-204ENST00000581226 LRPPRCP42704 1394 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 PIK3R4Q99570 1358 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 IGHV3OR15-7A0A075B7D8 119 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 GOLGA8IPA6NC78 632 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 EFCAB9A8MZ26 197 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 TP53I11O14683 189 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 EEF1E1O43324 174 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 SNAP29O95721 258 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 GYPCP04921 128 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 OR12D1P0DN82 309 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 PSKH1P11801 424 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 PSMB9P28065 219 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 STC1P52823 247 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 SKP2Q13309 424 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 PCOTHQ58A44 107 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 BLIDQ8IZY5 108 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 C2orf73Q8N5S3 287 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 OR9I1Q8NGQ6 314 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 OR5C1Q8NGR4 320 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 MFSD8Q8NHS3 518 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 MED10Q9BTT4 135 aa1.6□□□□□ -2.15
SMCHD1-204ENST00000581226 POTEKPQ9BYX7 375 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms