RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 LNP1A1A4G5 178 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 APCSP02743 223 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 SRSF9Q13242 221 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTPRM-211ENST00000580170 FLYWCH2Q96CP2 140 aaKnown RBP18.65■□□□□ 0.58
PTPRM-211ENST00000580170 RCC1P18754 421 aaPredicted RBP18.65■□□□□ 0.58
PTPRM-211ENST00000580170 PAFAH1B2P68402 229 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 LINC00596Q86U02 117 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 USP54Q70EL1 1684 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 OR1L1Q8NH94 360 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 IGHV5-10-1A0A0J9YXX1 117 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 GCGP01275 180 aa18.65■□□□□ 0.58
PTPRM-211ENST00000580170 FAM3BP58499 235 aaPredicted RBP18.65■□□□□ 0.58
PTPRM-211ENST00000580170 PUSL1Q8N0Z8 303 aaKnown RBP18.65■□□□□ 0.58
PTPRM-211ENST00000580170 MELTFP08582 738 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 GZMHP20718 246 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 COMPP49747 757 aaPredicted RBP18.64■□□□□ 0.58
PTPRM-211ENST00000580170 C10orf113Q5VZT2 155 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 C16orf82Q7Z2V1 217 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 RNF122Q9H9V4 155 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 PCOLCE2Q9UKZ9 415 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 SMCHD1A6NHR9 2005 aa18.64■□□□□ 0.58
PTPRM-211ENST00000580170 LIFP15018 202 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 A0A1B0GV90 55 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 IGSF23A1L1A6 192 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 MMP16P51512 607 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 RNF7Q9UBF6 113 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 NMBP08949 121 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 PGA4P0DJD7 388 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 PGA5P0DJD9 388 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 MUC1P15941 1255 aaPredicted RBP18.64■□□□□ 0.57
PTPRM-211ENST00000580170 CXCL2P19875 107 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 MDKP21741 143 aaPredicted RBP18.64■□□□□ 0.57
PTPRM-211ENST00000580170 HERVK_113P61574 105 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 PITX3O75364 302 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 CD3EP07766 207 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 SEC11BP0C7V7 166 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 RAB1CQ92928 201 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 PRNDQ9UKY0 176 aa18.64■□□□□ 0.57
PTPRM-211ENST00000580170 VSIG10L2P0DP72 767 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 WDR31Q8NA23 367 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 SLC25A40Q8TBP6 338 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 CXorf1O96002 111 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 KIR2DL1P43626 348 aaPredicted RBP18.63■□□□□ 0.57
PTPRM-211ENST00000580170 LGALS7P47929 136 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 OR8B3Q8NGG8 313 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 OR8B2Q96RD0 313 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 GPR61Q9BZJ8 451 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 ASCL3Q9NQ33 180 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 OR8A1Q8NGG7 326 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 OR4X1Q8NH49 305 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 ZNF71Q9NQZ8 489 aaPredicted RBP18.63■□□□□ 0.57
PTPRM-211ENST00000580170 IGHV3OR15-7A0A075B7D8 119 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 GNG7O60262 68 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 CA2P00918 260 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 KHDC3LQ587J8 217 aa18.63■□□□□ 0.57
PTPRM-211ENST00000580170 FOXS1O43638 330 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 EIF3GO75821 320 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTPRM-211ENST00000580170 ATP6V0CP27449 155 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 TGIF2LYQ8IUE0 185 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 ZNF665Q9H7R5 613 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 SPATA45Q537H7 98 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 DOLPP1Q86YN1 238 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 C7orf66A4D0T2 115 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 SIGLEC5O15389 551 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 SIGLEC14Q08ET2 396 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 RIGQ13278 110 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 PRSS27Q9BQR3 290 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 PTX4Q96A99 478 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 PPP1R3EQ9H7J1 279 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 DMRT1Q9Y5R6 373 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 MFSD2BA6NFX1 497 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 TRGC2P03986 189 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 COL8A1P27658 744 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 AESQ08117 197 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 C1orf53Q5VUE5 145 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 ZBTB34Q8NCN2 500 aa18.62■□□□□ 0.57
PTPRM-211ENST00000580170 A0A1W2PPC1 479 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 TMEM210A6NLX4 147 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 LEMD1Q68G75 181 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 HSPB9Q9BQS6 159 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 CD1AP06126 327 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 RPL30P62888 115 aaKnown RBP18.61■□□□□ 0.57
PTPRM-211ENST00000580170 DCAF12L2Q5VW00 463 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 RASL11BQ9BPW5 248 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 PGLYRP3Q96LB9 341 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 SAP30LQ9HAJ7 183 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 CTXND1A0A1B0GTU2 59 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 BRS3P32247 399 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 MRPL30Q8TCC3 161 aaKnown RBP18.61■□□□□ 0.57
PTPRM-211ENST00000580170 PERPQ96FX8 193 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 CLN8Q9UBY8 286 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 IL11P20809 199 aa18.61■□□□□ 0.57
PTPRM-211ENST00000580170 RBM11P57052 281 aaKnown RBP18.61■□□□□ 0.57
PTPRM-211ENST00000580170 ZNF385AQ96PM9 386 aaKnown RBP18.61■□□□□ 0.57
PTPRM-211ENST00000580170 SMPD2O60906 423 aa18.6■□□□□ 0.57
PTPRM-211ENST00000580170 IL9P15248 144 aa18.6■□□□□ 0.57
PTPRM-211ENST00000580170 LRRC3BQ96PB8 259 aa18.6■□□□□ 0.57
PTPRM-211ENST00000580170 SPOCK3Q9BQ16 436 aa18.6■□□□□ 0.57
PTPRM-211ENST00000580170 DDA1Q9BW61 102 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms