RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 SCN1BQ07699 218 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 UNC119Q13432 240 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 P2RY14Q15391 338 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 GLT8D1Q68CQ7 371 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 AWAT2Q6E213 333 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 OSR2Q8N2R0 312 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 TPRX1Q8N7U7 411 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 MRPS26Q9BYN8 205 aaKnown RBP10.67□□□□□ -0.7
TRAF4-214ENST00000580073 SSR3Q9UNL2 185 aa10.67□□□□□ -0.7
TRAF4-214ENST00000580073 LOC100506127A0A0U1RQW1 187 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 PSMB11A5LHX3 300 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 ZNF729A6NN14 1252 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-214ENST00000580073 SLC17A2O00624 439 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 GEMIN2O14893 280 aaKnown RBP10.66□□□□□ -0.7
TRAF4-214ENST00000580073 SLC2A2P11168 524 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-214ENST00000580073 CDK2P24941 298 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 HTR2CP28335 458 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 RBM11P57052 281 aaKnown RBP10.66□□□□□ -0.7
TRAF4-214ENST00000580073 LSM3P62310 102 aaKnown RBP10.66□□□□□ -0.7
TRAF4-214ENST00000580073 HLA-DRB5Q30154 266 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 DEFB121Q5J5C9 76 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 NHLRC3Q5JS37 347 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 C9orf152Q5JTZ5 239 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 HES5Q5TA89 166 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 PRAMEF5Q5TYX0 476 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 SIGIRRQ6IA17 410 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 Q6ZS46 218 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 SLC16A12Q6ZSM3 486 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 CHPT1Q8WUD6 406 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 CORO2AQ92828 525 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 FAM46BQ96A09 425 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 RPEQ96AT9 228 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 CPNE2Q96FN4 548 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-214ENST00000580073 FUNDC2Q9BWH2 189 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 OR6C3Q9NZP0 311 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 ST3GAL6Q9Y274 331 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 V9GY05 133 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 DNAH3Q8TD57 4116 aa10.66□□□□□ -0.7
TRAF4-214ENST00000580073 A0A0A6YYD4 124 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 TMEM14DPA8MWL7 114 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 K7EIL1 84 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 DEGS1O15121 323 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 LDLRAD4O15165 306 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 IGLV1-47P01700 117 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 ZNF44P15621 663 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 MGMTP16455 207 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 SDC2P34741 201 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 SLC35B1P78383 322 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 EGFEM1PQ0D2K5 195 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 IL13RA2Q14627 380 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 TPTE2P1Q5T6R2 138 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 COMMD1Q8N668 190 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 OR6M1Q8NGM8 313 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 PLPPR1Q8TBJ4 325 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 TOMM40LQ969M1 308 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 COQ2Q96H96 371 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 Q96M66 194 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
TRAF4-214ENST00000580073 A0A087X0M5 115 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 A0A1B0GX30 115 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 ODAMA1E959 279 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 IFITM5A6NNB3 132 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 BUB1B-PAK6H3BSN5 160 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 AIREO43918 545 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 GTF2F2P13984 249 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 RAB3BP20337 219 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 RBM39Q14498 530 aaKnown RBP10.64□□□□□ -0.71
TRAF4-214ENST00000580073 RAB11BQ15907 218 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 C2orf76Q3KRA6 126 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 KRBOX4Q5JUW0 171 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 OR9G1Q8NH87 305 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 NICN1Q9BSH3 213 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 SELENOIQ9C0D9 397 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 VCX3AQ9NNX9 186 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 ZFP57Q9NU63 452 aa10.64□□□□□ -0.71
TRAF4-214ENST00000580073 TMEM272A0A1B0GTI8 110 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 NUDT19A8MXV4 375 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 HSPB6O14558 160 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 FGF16O43320 207 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 ZNF780AO75290 641 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-214ENST00000580073 CRTAPO75718 401 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-214ENST00000580073 CSTBP04080 98 aaKnown RBP10.63□□□□□ -0.71
TRAF4-214ENST00000580073 MYL9P24844 172 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 GLIPR1P48060 266 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 NCS1P62166 190 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 MXD1Q05195 221 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 AESQ08117 197 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 TCTEX1D4Q5JR98 221 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 THNSL2Q86YJ6 484 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 ZNF565Q8N9K5 539 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 SUMF2Q8NBJ7 301 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 FAM3DQ96BQ1 224 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 KCTD7Q96MP8 289 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 S100A13Q99584 98 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 IFT22Q9H7X7 185 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 PLGRKTQ9HBL7 147 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 ZNF286AQ9HBT8 521 aa10.63□□□□□ -0.71
TRAF4-214ENST00000580073 STEAP1Q9UHE8 339 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms