RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 VWFP04275 2813 aa11.89□□□□□ -0.51
SS18-212ENST00000579061 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 SPINT2O43291 252 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 BPNT1O95861 308 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 MAP2K4P45985 399 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 GNG10P50151 68 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 LOXL3P58215 753 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 RPS27AP62979 156 aaKnown RBP11.88□□□□□ -0.51
SS18-212ENST00000579061 C2orf68Q2NKX9 166 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 SYT6Q5T7P8 510 aaPredicted RBP11.88□□□□□ -0.51
SS18-212ENST00000579061 OR10X1Q8NGY0 326 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 CAPSLQ8WWF8 208 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 LEAP2Q969E1 77 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 SLC25A33Q9BSK2 321 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 TMEM59Q9BXS4 323 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 Q9H521 79 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 ACOT13Q9NPJ3 140 aa11.88□□□□□ -0.51
SS18-212ENST00000579061 MBNL3Q9NUK0 354 aaKnown RBP11.88□□□□□ -0.51
SS18-212ENST00000579061 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 C12orf77C9JDV5 145 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 M0QZK8 103 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 SDCBPO00560 298 aaPredicted RBP11.87□□□□□ -0.51
SS18-212ENST00000579061 SLC17A2O00624 439 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
SS18-212ENST00000579061 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 CHATP28329 748 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 PSMD7P51665 324 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 BLCAPP62952 87 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 ZNF816Q0VGE8 651 aaPredicted RBP11.87□□□□□ -0.51
SS18-212ENST00000579061 OR2W3Q7Z3T1 314 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 OR4K15Q8NH41 348 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 WIPF2Q8TF74 440 aaPredicted RBP11.87□□□□□ -0.51
SS18-212ENST00000579061 NEDD4LQ96PU5 975 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 YTHDF1Q9BYJ9 559 aaKnown RBP11.87□□□□□ -0.51
SS18-212ENST00000579061 WNT10AQ9GZT5 417 aa11.87□□□□□ -0.51
SS18-212ENST00000579061 UBE2QL1A1L167 161 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 HBZP02008 142 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 GAPDHP04406 335 aaKnown RBP11.86□□□□□ -0.51
SS18-212ENST00000579061 VSIG10L2P0DP72 767 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 CD24P25063 80 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
SS18-212ENST00000579061 QRFPP83859 136 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 FABP5Q01469 135 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 UNC119Q13432 240 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
SS18-212ENST00000579061 ARSJQ5FYB0 599 aaPredicted RBP11.86□□□□□ -0.51
SS18-212ENST00000579061 STEAP3Q658P3 488 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 OR10K2Q6IF99 312 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 SVOPQ8N4V2 548 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
SS18-212ENST00000579061 GFI1Q99684 422 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 PLGRKTQ9HBL7 147 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 LRRC42Q9Y546 428 aa11.86□□□□□ -0.51
SS18-212ENST00000579061 HSD17B6O14756 317 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 PEX14O75381 377 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 CSF1P09603 554 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 ARSBP15848 533 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 RCC1P18754 421 aaPredicted RBP11.85□□□□□ -0.51
SS18-212ENST00000579061 IL3RAP26951 378 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 ZNF137PP52743 207 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 EMX1Q04741 257 aaPredicted RBP11.85□□□□□ -0.51
SS18-212ENST00000579061 SSX1Q16384 188 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 Q6ZS46 218 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 SLC25A48Q6ZT89 311 aaKnown RBP11.85□□□□□ -0.51
SS18-212ENST00000579061 DRAM1Q8N682 238 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 ZNF439Q8NDP4 499 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 UBALD1Q8TB05 177 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 SULT4A1Q9BR01 284 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 URM1Q9BTM9 101 aaKnown RBP11.85□□□□□ -0.51
SS18-212ENST00000579061 TAF9BQ9HBM6 251 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 NDUFB11Q9NX14 153 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 KCNIP1Q9NZI2 227 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 GNG12Q9UBI6 72 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 MOB4Q9Y3A3 225 aa11.85□□□□□ -0.51
SS18-212ENST00000579061 AK6Q9Y3D8 172 aaKnown RBP11.85□□□□□ -0.51
SS18-212ENST00000579061 IGHV3-43A0A0B4J1X8 118 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 TRAV1-2A0A0B4J238 106 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 A0A1W2PPE3 182 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 FBXO24O75426 580 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 AMY1AP04745 511 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 AMY2AP04746 511 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 SNRNP70P08621 437 aaKnown RBP11.84□□□□□ -0.51
SS18-212ENST00000579061 IGHV3-43DP0DP04 118 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 GALP22466 123 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 CALRP27797 417 aaKnown RBP11.84□□□□□ -0.51
SS18-212ENST00000579061 EBI3Q14213 229 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 RAB11BQ15907 218 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 NKAPLQ5M9Q1 402 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 LY6G6FQ5SQ64 297 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 CD200R1LQ6Q8B3 271 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 FAM89BQ8N5H3 189 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 OR56B4Q8NH76 319 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 OR1L1Q8NH94 360 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 ST6GALNAC6Q969X2 333 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms