RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 C10orf82Q8WW14 230 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 CMBLQ96DG6 245 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 IL4I1Q96RQ9 567 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 CLCC1Q96S66 551 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 FMO2Q99518 471 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 EMC6Q9BV81 110 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 CHID1Q9BWS9 393 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 NDEL1Q9GZM8 345 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 WDR55Q9H6Y2 383 aaPredicted RBP4.05□□□□□ -1.76
PTPRM-208ENST00000578600 METTL8Q9H825 291 aaKnown RBP4.05□□□□□ -1.76
PTPRM-208ENST00000578600 BCL2L10Q9HD36 194 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 SLCO1B3Q9NPD5 702 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 PSMC3IPQ9P2W1 217 aaPredicted RBP4.05□□□□□ -1.76
PTPRM-208ENST00000578600 ATPIF1Q9UII2 106 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 RPUSD1Q9UJJ7 312 aaKnown RBP4.05□□□□□ -1.76
PTPRM-208ENST00000578600 ZNF229Q9UJW7 825 aa4.05□□□□□ -1.76
PTPRM-208ENST00000578600 ZNF443Q9Y2A4 671 aaPredicted RBP4.05□□□□□ -1.76
PTPRM-208ENST00000578600 NOTCH3Q9UM47 2321 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 A6NIZ1 184 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 CLDN24A6NM45 220 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 TRDCB7Z8K6 153 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 M0R1W7 72 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 COPEO14579 308 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 RFXANKO14593 260 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 NPFFO15130 113 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 GMDSO60547 372 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 WBP4O75554 376 aaKnown RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 IGF2P01344 180 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 MMP7P09237 267 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 PGA4P0DJD7 388 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 PGA3P0DJD8 388 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 CCL2P13500 99 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 MUC1P15941 1255 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 VDAC1P21796 283 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 PPIBP23284 216 aaKnown RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 LEPP41159 167 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 ZNF133P52736 654 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 RAP1BP61224 184 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 ERVS71-1P61550 626 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 RAP1AP62834 184 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 CXCL6P80162 114 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 CKAP4Q07065 602 aaKnown RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 FADDQ13158 208 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 SNCBQ16143 134 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 HIST3H3Q16695 136 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 MICBQ29980 383 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 LRRC75BQ2VPJ9 315 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 LRRC10Q5BKY1 277 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 DMRTC1Q5HYR2 192 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 TTC33Q6PID6 262 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 FBXW12Q6X9E4 464 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 SLC30A8Q8IWU4 369 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 NRMQ8IXM6 262 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 Q8N2B8 174 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 LRRC18Q8N456 261 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 CLDN22Q8N7P3 220 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 OR4X2Q8NGF9 303 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 RHOXF1Q8NHV9 184 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 CAPSLQ8WWF8 208 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 APOBEC3DQ96AK3 386 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 C12orf43Q96C57 262 aaKnown RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 TBX15Q96SF7 602 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 CHRDL1Q9BU40 450 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 OR2H1Q9GZK4 316 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 DNTTIP1Q9H147 329 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 ABCB10Q9NRK6 738 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 KAAG1Q9UBP8 84 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 FIS1Q9Y3D6 152 aa4.04□□□□□ -1.76
PTPRM-208ENST00000578600 TSSC4Q9Y5U2 329 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-208ENST00000578600 A0A1B0GWA3 101 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 OR6C6A6NF89 314 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 E9PBE3 544 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 NDUFB3O43676 98 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 PLIN3O60664 434 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 ZNF254O75437 659 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 BGLAPP02818 100 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 ZNF735P0CB33 412 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 IGLL1P15814 213 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 ZNF32P17041 273 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 MSR1P21757 451 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 IFNA8P32881 189 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 MPV17P39210 176 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 NAA10P41227 235 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-208ENST00000578600 DSTNP60981 165 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 ARF6P62330 175 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 PSG4Q00888 419 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 ECH1Q13011 328 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 OR8B8Q15620 311 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 SGCAQ16586 387 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 HHATQ5VTY9 493 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 DHDDSQ86SQ9 333 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 ZNF101Q8IZC7 436 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 CLECL1Q8IZS7 167 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 KRTCAP2Q8N6L1 136 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 NOXO1Q8NFA2 376 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 RASSF5Q8WWW0 418 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 OR52E6Q96RD3 313 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 MCHR1Q99705 422 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 YY1AP1Q9H869 796 aa4.03□□□□□ -1.76
PTPRM-208ENST00000578600 OR1A1Q9P1Q5 309 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms