RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 IGHG4P01861 327 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 IGF1P05019 195 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 GLP1RP43220 463 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 KISS1Q15726 138 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 TP53I3Q53FA7 332 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 ZNF529Q6P280 563 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 TRAT1Q6PIZ9 186 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 BAIAP2L2Q6UXY1 529 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 OR10X1Q8NGY0 326 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 PPIL3Q9H2H8 161 aaKnown RBP8.83□□□□□ -1
SMARCE1-214ENST00000578112 PAK1IP1Q9NWT1 392 aaPredicted RBP8.83□□□□□ -1
SMARCE1-214ENST00000578112 DMRT1Q9Y5R6 373 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 IGHV1-3A0A0C4DH29 117 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 MITFO75030 526 aaPredicted RBP8.83□□□□□ -1
SMARCE1-214ENST00000578112 IGKV1D-33P01593 117 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 IGKV1-33P01594 117 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 TMEM225BP0DP42 221 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 NFYBP25208 207 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 RBM39Q14498 530 aaKnown RBP8.83□□□□□ -1
SMARCE1-214ENST00000578112 MPV17LQ2QL34 196 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 FAM71E2Q8N5Q1 922 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 ACBD7Q8N6N7 88 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 KIF25Q9UIL4 384 aa8.83□□□□□ -1
SMARCE1-214ENST00000578112 ZNF256Q9Y2P7 627 aaPredicted RBP8.83□□□□□ -1
SMARCE1-214ENST00000578112 TMEM30CPA0ZSE6 113 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 MEX3AA1L020 520 aaKnown RBP8.82□□□□□ -1
SMARCE1-214ENST00000578112 H0YJX3 145 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 SHOXO15266 292 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 HCKP08631 526 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 OR8U8P0C7N1 319 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 VDAC1P21796 283 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 SNU13P55769 128 aaKnown RBP8.82□□□□□ -1
SMARCE1-214ENST00000578112 ATXN7L3Q14CW9 347 aaPredicted RBP8.82□□□□□ -1
SMARCE1-214ENST00000578112 Q6ZNX1 250 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 LINC00518Q8N0U6 118 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 Q8N9W7 124 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 OR13A1Q8NGR1 328 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 OR13C9Q8NGT0 318 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 EAF1Q96JC9 268 aaPredicted RBP8.82□□□□□ -1
SMARCE1-214ENST00000578112 LRRC42Q9Y546 428 aa8.82□□□□□ -1
SMARCE1-214ENST00000578112 TRAV24A0A0B4J272 114 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 ZNF780AO75290 641 aaPredicted RBP8.81□□□□□ -1
SMARCE1-214ENST00000578112 MOSP00540 346 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 RAB3AP20336 220 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 TSPAN5P62079 268 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 LY6G6FQ5SQ64 297 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 STEAP3Q658P3 488 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 ZNF329Q86UD4 541 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 CROCCP3Q8IVE0 287 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 MRGPRDQ8TDS7 321 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 CENPNQ96H22 339 aaPredicted RBP8.81□□□□□ -1
SMARCE1-214ENST00000578112 RASL11BQ9BPW5 248 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 SPACA1Q9HBV2 294 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 PALMDQ9NP74 551 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 IMPAD1Q9NX62 359 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 AP4S1Q9Y587 144 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 M0R129 80 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 BET1O15155 118 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 SNAPINO95295 136 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 EPHA2P29317 976 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 RASSF2P50749 326 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 NANOS3P60323 173 aaKnown RBP8.81□□□□□ -1
SMARCE1-214ENST00000578112 GALEQ14376 348 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 NKAPLQ5M9Q1 402 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 RDH10Q8IZV5 341 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 RNFT2Q96EX2 444 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 UBE2E2Q96LR5 201 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 S1PR3Q99500 378 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 DHDHQ9UQ10 334 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 ORC6Q9Y5N6 252 aa8.81□□□□□ -1
SMARCE1-214ENST00000578112 SH2D7A6NKC9 451 aaPredicted RBP8.8□□□□□ -1
SMARCE1-214ENST00000578112 SEC14L6B5MCN3 397 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 CA11O75493 328 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 RPP30P78346 268 aaKnown RBP8.8□□□□□ -1
SMARCE1-214ENST00000578112 SCN1BQ07699 218 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 GPR176Q14439 515 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 ZNF429Q86V71 674 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 TFAP2CQ92754 450 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 ST6GALNAC6Q969X2 333 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 SLC7A6OSQ96CW6 309 aaPredicted RBP8.8□□□□□ -1
SMARCE1-214ENST00000578112 PELI1Q96FA3 418 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 Q96MT0 163 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 NOL4LQ96MY1 436 aaPredicted RBP8.8□□□□□ -1
SMARCE1-214ENST00000578112 DPCDQ9BVM2 203 aaPredicted RBP8.8□□□□□ -1
SMARCE1-214ENST00000578112 GFOD1Q9NXC2 390 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 SCOCQ9UIL1 159 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 LANCL1O43813 399 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 RBBP9O75884 186 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 PSMB8P28062 276 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 DOC2BQ14184 412 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 CNPY1Q3B7I2 92 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 MOB3BQ86TA1 216 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 OR51A2Q8NGJ7 313 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 RTN4IP1Q8WWV3 396 aaPredicted RBP8.8□□□□□ -1
SMARCE1-214ENST00000578112 RFT1Q96AA3 541 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 METTL9Q9H1A3 318 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 SMAD5-AS1Q9Y6J3 95 aa8.8□□□□□ -1
SMARCE1-214ENST00000578112 FAM172BPA6NC97 362 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 GABRPO00591 440 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 ODF1Q14990 250 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms