RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CISD1Q9NZ45 108 aaKnown RBP9.38□□□□□ -0.91
SEC22B-201ENST00000578049 PCM1Q15154 2024 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 PAPPA2Q9BXP8 1791 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 DANCRP0C864 163 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 IER3P46695 156 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 P2RY4P51582 365 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 HPRT1P00492 218 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 Q56UQ5 140 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 MISP3Q96FF7 219 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 A8MXK9 166 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 SPRY3O43610 288 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 OR2J3O76001 311 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 OR11H4Q8NGC9 324 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 MELTFP08582 738 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 HOXD4P09016 255 aaPredicted RBP9.38□□□□□ -0.91
SEC22B-201ENST00000578049 CD1BP29016 333 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 MARS2Q96GW9 593 aaKnown RBP9.38□□□□□ -0.91
SEC22B-201ENST00000578049 SFXN3Q9BWM7 321 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 GPR35Q9HC97 309 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 SYNGR1O43759 233 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 ACP1P24666 158 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 GAB4Q2WGN9 574 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 ADIPOR1Q96A54 375 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 PSMG3Q9BT73 122 aaPredicted RBP9.38□□□□□ -0.91
SEC22B-201ENST00000578049 OR5AC2Q9NZP5 309 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 BTF3P20290 206 aaKnown RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 TNFAIP6P98066 277 aaPredicted RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 TPRP12270 2363 aaKnown RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 HKR1P10072 659 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 C10orf113Q5VZT2 155 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 INO80CQ6PI98 192 aaPredicted RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 TNFSF15O95150 251 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 FGF12P61328 243 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 OR2M3Q8NG83 312 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 DOK5Q9P104 306 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 HYAL3O43820 417 aaPredicted RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 RCC1P18754 421 aaPredicted RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 MEOX1P50221 254 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 RPL30P62888 115 aaKnown RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 C19orf24Q9BVV8 132 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 VENTXO95231 258 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 TRGC2P03986 189 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 SAXO1Q8IYX7 474 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 IL17BQ9UHF5 180 aa9.37□□□□□ -0.91
SEC22B-201ENST00000578049 MBD1Q9UIS9 605 aaPredicted RBP9.37□□□□□ -0.91
SEC22B-201ENST00000578049 MS4A18H0YCH9 400 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 M0R296 226 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 HOXB1P14653 301 aaPredicted RBP9.36□□□□□ -0.91
SEC22B-201ENST00000578049 H2BFSP57053 126 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 MS4A18Q3C1V0 323 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 MRPL54Q6P161 138 aaKnown RBP9.36□□□□□ -0.91
SEC22B-201ENST00000578049 ERASQ7Z444 233 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 UBALD1Q8TB05 177 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 HIST1H2BAQ96A08 127 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 SCN4AP35499 1836 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 IGLV1-36A0A0B4J1U3 117 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 REC114Q7Z4M0 266 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 TP53RKQ96S44 253 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 PRR13Q9NZ81 148 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 NPTNQ9Y639 398 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 K7ESF4 209 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 LCN2P80188 198 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 ASCL5Q7RTU5 278 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 VASH2Q86V25 355 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 KLHDC2Q9Y2U9 406 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 DEFB108AA8MXU0 73 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM30BQ3MIR4 351 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 ZNF385CQ66K41 422 aaPredicted RBP9.36□□□□□ -0.91
SEC22B-201ENST00000578049 APCDD1LQ8NCL9 501 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 BLNKQ8WV28 456 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 A6NJY4 79 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 SLC23A3Q6PIS1 610 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 TUBA4BQ9H853 241 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 WASHC3Q9Y3C0 194 aa9.36□□□□□ -0.91
SEC22B-201ENST00000578049 IGHV1OR15-9A0A0B4J2B8 117 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 ZNF716A6NP11 495 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 SDHCQ99643 169 aaPredicted RBP9.35□□□□□ -0.91
SEC22B-201ENST00000578049 ORM2P19652 201 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 TCL1AP56279 114 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 TCTAP57738 103 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 TDHQ8IZJ6 230 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
SEC22B-201ENST00000578049 LSM10Q969L4 123 aaKnown RBP9.35□□□□□ -0.91
SEC22B-201ENST00000578049 MSL2Q9HCI7 577 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 PIN1P1O15428 100 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 FOXS1O43638 330 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 PSG2P11465 335 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 GLIPR1P48060 266 aa9.35□□□□□ -0.91
SEC22B-201ENST00000578049 COMPP49747 757 aaPredicted RBP9.35□□□□□ -0.91
SEC22B-201ENST00000578049 RPS4XP62701 263 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms