RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 WNT4P56705 351 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 TAS2R43P59537 309 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 EGFEM1PQ0D2K5 195 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 EBI3Q14213 229 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ATAD3CQ5T2N8 411 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 IZUMO1Q8IYV9 350 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 LINC00311Q8N616 119 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 Q8N6K4 173 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 OR52M1Q8NGK5 317 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 UBALD1Q8TB05 177 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ARL11Q969Q4 196 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 S100A13Q99584 98 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GFOD1Q9NXC2 390 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 LINC00527Q9UJ94 153 aa13.14□□□□□ -0.31
CDK5RAP3-206ENST00000578018 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 CCRL2O00421 344 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ORC5O43913 435 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ZNF780AO75290 641 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GPX5O75715 221 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GAPDHP04406 335 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 FSTP19883 344 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 THBS3P49746 956 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GABARAPL2P60520 117 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 RPS11P62280 158 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SLC22A6Q4U2R8 563 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 DMKNQ6E0U4 476 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 FAM53AQ6NSI3 398 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ZNF497Q6ZNH5 498 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 C18orf65Q6ZTR6 163 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SLC35E3Q7Z769 313 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 MOB3BQ86TA1 216 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 C8orf31Q8N9H6 132 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 CCDC107Q8WV48 283 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GHSRQ92847 366 aa13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 EAF1Q96JC9 268 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 RCC2Q9P258 522 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-206ENST00000578018 TRAV8-7A0A075B6U6 113 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 IGHV3-72A0A0B4J1Y9 119 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 AIPO00170 330 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 MT-ND4P03905 459 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GTF2F2P13984 249 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 HOXD3P31249 432 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 Q499Y3 187 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 YIF1BQ5BJH7 314 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 C8orf86Q6ZUL3 223 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 TGIF2LXQ8IUE1 241 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 STPG2Q8N412 459 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ZFP41Q8N8Y5 198 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 PGLYRP3Q96LB9 341 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 CKLFQ9UBR5 152 aa13.12□□□□□ -0.31
CDK5RAP3-206ENST00000578018 DNAH9Q9NYC9 4486 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 IGHV3-43A0A0B4J1X8 118 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 LINC01548A6NM66 108 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 IGHV3-43DP0DP04 118 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SLC6A1P30531 599 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SLC35B1P78383 322 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SPHARQ15513 63 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 Q3ZCU0 254 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 FOXRED2Q8IWF2 684 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 COMMD1Q8N668 190 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 MUL1Q969V5 352 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GPR61Q9BZJ8 451 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SPACA1Q9HBV2 294 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ZFP57Q9NU63 452 aa13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 LIN7CQ9NUP9 197 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-206ENST00000578018 NBEAL2Q6ZNJ1 2754 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 TRBV5-7A0A0A0MS05 114 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 C12orf77C9JDV5 145 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 SLC31A2O15432 143 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 IL3RAP26951 378 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GPR12P47775 334 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GPR50Q13585 617 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 DOC2BQ14184 412 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GPR176Q14439 515 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 GAPTQ8N292 157 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 Q8N9W7 124 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ZNF439Q8NDP4 499 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 OR2T10Q8NGZ9 312 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 DPF1Q92782 380 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 OR14A2Q96R54 314 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 P2RX4Q99571 388 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 ABCG5Q9H222 651 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 MRPS28Q9Y2Q9 187 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 TENM3Q9P273 2699 aa13.1□□□□□ -0.31
CDK5RAP3-206ENST00000578018 NCBP2LA6PVI3 153 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-206ENST00000578018 AP4M1O00189 453 aa13.09□□□□□ -0.31
CDK5RAP3-206ENST00000578018 CD1BP29016 333 aa13.09□□□□□ -0.31
CDK5RAP3-206ENST00000578018 MYCNOSP40205 109 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms