RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ACTG1P63261 375 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 C6orf183Q5T699 404 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 IDNKQ5T6J7 187 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 OLFML2AQ68BL7 652 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 FAM53AQ6NSI3 398 aaPredicted RBP12.8□□□□□ -0.36
CHD3-215ENST00000572750 Q6ZPA2 131 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 C5orf24Q7Z6I8 188 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 TAF15Q92804 592 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHD3-215ENST00000572750 PECRQ9BY49 303 aa12.8□□□□□ -0.36
CHD3-215ENST00000572750 NAA50Q9GZZ1 169 aaKnown RBP12.8□□□□□ -0.36
CHD3-215ENST00000572750 CHMP1AQ9HD42 196 aaPredicted RBP12.8□□□□□ -0.36
CHD3-215ENST00000572750 SDCBPO00560 298 aaPredicted RBP12.79□□□□□ -0.36
CHD3-215ENST00000572750 ORC5O43913 435 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 IGLV1-47P01700 117 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 HBZP02008 142 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 GZMHP20718 246 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 SSX2Q16385 188 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 LRRC75BQ2VPJ9 315 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 SLC16A12Q6ZSM3 486 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 TMEM86BQ8N661 226 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 SETD6Q8TBK2 473 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 MBNL3Q9NUK0 354 aaKnown RBP12.79□□□□□ -0.36
CHD3-215ENST00000572750 HSF4Q9ULV5 492 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 HILPDAQ9Y5L2 63 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 POMT1Q9Y6A1 747 aa12.79□□□□□ -0.36
CHD3-215ENST00000572750 A0A075B6Q4 140 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 A0A1W2PPE3 182 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 H3BUX3 64 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 TOR1AO14656 332 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 SPINT2O43291 252 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 NAPSAO96009 420 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 TFAP2AP05549 437 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 HTR1DP28221 377 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 SERPINB10P48595 397 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 VBP1P61758 197 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 HLA-DRB5Q30154 266 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 TRAT1Q6PIZ9 186 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 Q6ZTK2 550 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 OR10A7Q8NGE5 316 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 OR10R2Q8NGX6 335 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 ZNF596Q8TC21 504 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 RAB3CQ96E17 227 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 SSX3Q99909 188 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 ATG5Q9H1Y0 275 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 DPAGT1Q9H3H5 408 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 TAF9BQ9HBM6 251 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 C12orf4Q9NQ89 552 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 VPREB3Q9UKI3 123 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 PSG11Q9UQ72 335 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
CHD3-215ENST00000572750 BTBD17A6NE02 478 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 RAB27BO00194 218 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 F2RL2O00254 374 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 GABARAPO95166 117 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 HIST1H1DP16402 221 aaKnown RBP12.77□□□□□ -0.37
CHD3-215ENST00000572750 GNB3P16520 340 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 RPS19P39019 145 aaKnown RBP12.77□□□□□ -0.37
CHD3-215ENST00000572750 ALDH3B2P48448 385 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 LOXL3P58215 753 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 GNMTQ14749 295 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 FAM189A2Q15884 450 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 GPR107Q5VW38 600 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 OR5H6Q8NGV6 325 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 PTX4Q96A99 478 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 MEGF9Q9H1U4 602 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 MMP28Q9H239 520 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 GFOD1Q9NXC2 390 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 KCNIP1Q9NZI2 227 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 GNG12Q9UBI6 72 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 KCNK7Q9Y2U2 307 aa12.77□□□□□ -0.37
CHD3-215ENST00000572750 METTL21EPA6NDL7 271 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 J3QR06 171 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 MFNGO00587 321 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 GPR137BO60478 399 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 HMGN3Q15651 99 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 LY6EQ16553 131 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 ZNF880Q6PDB4 577 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 C16orf87Q6PH81 154 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 MOB1BQ7L9L4 216 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 OR5R1Q8NH85 324 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 SLC25A38Q96DW6 304 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 ETV7Q9Y603 341 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 VWFP04275 2813 aa12.76□□□□□ -0.37
CHD3-215ENST00000572750 BUB1B-PAK6H3BSN5 160 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 RAB13P51153 203 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 PRRX1P54821 245 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 CTF1Q16619 201 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 TPTE2P1Q5T6R2 138 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 ANKRD13BQ86YJ7 626 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms