RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PELI1Q96FA3 418 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 CHCHD6Q9BRQ6 235 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 GHITMQ9H3K2 345 aa15.33■□□□□ 0.04
CCDC40-206ENST00000572083 MAGEA13PA6NCF6 341 aa15.32■□□□□ 0.04
CCDC40-206ENST00000572083 OR7C1O76099 320 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-206ENST00000572083 HTR3BO95264 441 aa15.32■□□□□ 0.04
CCDC40-206ENST00000572083 VHLP40337 213 aa15.32■□□□□ 0.04
CCDC40-206ENST00000572083 VEGFCP49767 419 aa15.32■□□□□ 0.04
CCDC40-206ENST00000572083 ALKBH1Q13686 389 aaKnown RBP15.32■□□□□ 0.04
CCDC40-206ENST00000572083 SLC25A48Q6ZT89 311 aaKnown RBP15.32■□□□□ 0.04
CCDC40-206ENST00000572083 C4orf36Q96KX1 117 aa15.32■□□□□ 0.04
CCDC40-206ENST00000572083 NKX1-2Q9UD57 310 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-206ENST00000572083 ENOPH1Q9UHY7 261 aa15.32■□□□□ 0.04
CCDC40-206ENST00000572083 ST3GAL6Q9Y274 331 aa15.32■□□□□ 0.04
CCDC40-206ENST00000572083 IGHV4OR15-8A0A075B7B6 117 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 A0A087WW49 117 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 TRAV41A0A0B4J266 112 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 OR8U9P0C7N5 309 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 CNTFRP26992 372 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 ZNF137PP52743 207 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 LSAMPQ13449 338 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 ZNF439Q8NDP4 499 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 OR10V1Q8NGI7 309 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 OR51A2Q8NGJ7 313 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 CASTOR1Q8WTX7 329 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 TSEN15Q8WW01 171 aaKnown RBP15.31■□□□□ 0.04
CCDC40-206ENST00000572083 TOLLIPQ9H0E2 274 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 GABARAPL1Q9H0R8 117 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 RIBC2Q9H4K1 309 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 POMPQ9Y244 141 aa15.31■□□□□ 0.04
CCDC40-206ENST00000572083 FAM90A10PA6NDY2 464 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 J3QRE1 110 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 JTBO76095 146 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 BLVRBP30043 206 aaPredicted RBP15.3■□□□□ 0.04
CCDC40-206ENST00000572083 ZNF134P52741 427 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 GALEQ14376 348 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 ZDHHC13Q8IUH4 622 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 PARP16Q8N5Y8 322 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 NEK7Q8TDX7 302 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 CPNE2Q96FN4 548 aaPredicted RBP15.3■□□□□ 0.04
CCDC40-206ENST00000572083 RITA1Q96K30 269 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 CHCHD3Q9NX63 227 aaKnown RBP15.3■□□□□ 0.04
CCDC40-206ENST00000572083 DHDHQ9UQ10 334 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 FRAS1Q86XX4 4008 aa15.3■□□□□ 0.04
CCDC40-206ENST00000572083 IGHV7-81A0A0B4J1V7 117 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 GEMIN2O14893 280 aaKnown RBP15.29■□□□□ 0.04
CCDC40-206ENST00000572083 ORC5O43913 435 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 CDRT1O95170 752 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 HLA-DRB1P01911 266 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 RBM11P57052 281 aaKnown RBP15.29■□□□□ 0.04
CCDC40-206ENST00000572083 ACTBP60709 375 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 PITPNAQ00169 270 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 ATP6AP1Q15904 470 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 ECSCRQ19T08 205 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 Q3ZCU0 254 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 CT45A1Q5HYN5 189 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 Q8N1Y9 231 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 CT45A3Q8NHU0 189 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 IFT22Q9H7X7 185 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 C19orf73Q9NVV2 129 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 GNG12Q9UBI6 72 aa15.29■□□□□ 0.04
CCDC40-206ENST00000572083 AIPO00170 330 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 MAGEB3O15480 346 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 LGALS1P09382 135 aaKnown RBP15.28■□□□□ 0.04
CCDC40-206ENST00000572083 RAB3AP20336 220 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 ATAD3CQ5T2N8 411 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 LYPD6Q86Y78 171 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 PRR18Q8N4B5 295 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 MINDY2Q8NBR6 621 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 OR4C12Q96R67 309 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 PDCD1LG2Q9BQ51 273 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 SPATA25Q9BR10 227 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 GABARAPL3Q9BY60 117 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 ANKRD60Q9BZ19 345 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 TPSG1Q9NRR2 321 aa15.28■□□□□ 0.04
CCDC40-206ENST00000572083 MRPS28Q9Y2Q9 187 aaKnown RBP15.28■□□□□ 0.04
CCDC40-206ENST00000572083 A0A1W2PN81 502 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 C12orf77C9JDV5 145 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 SOX15O60248 233 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 SERPINA2P20848 420 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 CHRNA7P36544 502 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 NDPQ00604 133 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 ZNF497Q6ZNH5 498 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 SGPP2Q8IWX5 399 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 OR52N1Q8NH53 320 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 TAS2R4Q9NYW5 299 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 FBXO7Q9Y3I1 522 aa15.27■□□□□ 0.04
CCDC40-206ENST00000572083 NBR2O15453 112 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 IGHV3-11P01762 117 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 MT-ND4P03905 459 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 NHLRC3Q5JS37 347 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 ZNF529Q6P280 563 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 ASCL4Q6XD76 172 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 AMIGO2Q86SJ2 522 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 ACBD7Q8N6N7 88 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 OR5AK2Q8NH90 309 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 OR1L1Q8NH94 360 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 ZNF251Q9BRH9 671 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 RSRP1Q9BUV0 290 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 ISG20L2Q9H9L3 353 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms