RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 IZUMO1Q8IYV9 350 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 FAM89BQ8N5H3 189 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 C11orf42Q8N5U0 333 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 TMEM86BQ8N661 226 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 ZNF565Q8N9K5 539 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 RAB2BQ8WUD1 216 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 ISOC1Q96CN7 298 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 DMRTB1Q96MA1 342 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 RHBDL2Q9NX52 303 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 TAS2R3Q9NYW6 316 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 CALYQ9NYX4 217 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 ABRACLQ9P1F3 81 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 COMMD3Q9UBI1 195 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 CEPT1Q9Y6K0 416 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 WNK1Q9H4A3 2382 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 IGHV1-69DA0A0B4J2H0 117 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 ZNF729A6NN14 1252 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-205ENST00000571028 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 G3V4G9 280 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 CLPXO76031 633 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 IGHV1-69P01742 117 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 IGHV3-7P01780 117 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 PRB2P02812 416 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-205ENST00000571028 GLAP06280 429 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 IGHV1-8P0DP01 117 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 RCC1P18754 421 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-205ENST00000571028 GDNFP39905 211 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 KRTAP10-3P60369 221 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 RPL15P61313 204 aaKnown RBP10.82□□□□□ -0.68
CCDC40-205ENST00000571028 MRPS15P82914 257 aaKnown RBP10.82□□□□□ -0.68
CCDC40-205ENST00000571028 C17orf58Q2M2W7 97 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 BEAN1Q3B7T3 259 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 C1orf122Q6ZSJ8 110 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 SAMD12Q8N8I0 201 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 CORO2AQ92828 525 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 TNFRSF14Q92956 283 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 ARL11Q969Q4 196 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 CMSS1Q9BQ75 279 aaKnown RBP10.82□□□□□ -0.68
CCDC40-205ENST00000571028 HEXA-AS1Q9H8Q6 139 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 KCNIP1Q9NZI2 227 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 SPATA2Q9UM82 520 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 ETV7Q9Y603 341 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 POMT1Q9Y6A1 747 aa10.82□□□□□ -0.68
CCDC40-205ENST00000571028 TRAV18A0A075B6X5 111 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 IGHV3-43A0A0B4J1X8 118 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 KBTBD11-OT1A0A1B0GTJ5 212 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 FOXI3A8MTJ6 420 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-205ENST00000571028 H3BMQ9 156 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 RAB27BO00194 218 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 CD3GP09693 182 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 IGHV3-43DP0DP04 118 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 BPIFB3P59826 476 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 MADCAM1Q13477 382 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 ARFRP1Q13795 201 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 CDNFQ49AH0 187 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 NCR3LG1Q68D85 454 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 Q6YL49 198 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 LINC01006Q8NI28 216 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 MRPL30Q8TCC3 161 aaKnown RBP10.81□□□□□ -0.68
CCDC40-205ENST00000571028 SSMEM1Q8WWF3 244 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 LEAP2Q969E1 77 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 PTX4Q96A99 478 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 SLC25A38Q96DW6 304 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 ELF5Q9UKW6 265 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-205ENST00000571028 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 SESN1Q9Y6P5 492 aa10.81□□□□□ -0.68
CCDC40-205ENST00000571028 FAM25AB3EWG3 89 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 FAM25CB3EWG5 89 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 FAM25GB3EWG6 89 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 NPFFO15130 113 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 CA11O75493 328 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 ARG1P05089 322 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 HIST1H1DP16402 221 aaKnown RBP10.8□□□□□ -0.68
CCDC40-205ENST00000571028 ZNF182P17025 639 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-205ENST00000571028 GZMHP20718 246 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 SOX6P35712 828 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 GUCA2AQ02747 115 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 UTF1Q5T230 341 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 C6orf183Q5T699 404 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 HCP5Q6MZN7 132 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 FAM53AQ6NSI3 398 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-205ENST00000571028 MZT2AQ6P582 158 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 OR13D1Q8NGV5 346 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 OR1L1Q8NH94 360 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 PRDM13Q9H4Q3 707 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 NCOR1P1Q9H4R4 102 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 DIABLOQ9NR28 239 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 IDI2-AS1Q9NZ38 188 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 KCNK7Q9Y2U2 307 aa10.8□□□□□ -0.68
CCDC40-205ENST00000571028 KMT2CQ8NEZ4 4911 aaKnown RBP10.8□□□□□ -0.68
CCDC40-205ENST00000571028 A0A0U1RQK1 487 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 MEIOCA2RUB1 952 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 C12orf77C9JDV5 145 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 SDCBPO00560 298 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-205ENST00000571028 MFNGO00587 321 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 SPINT2O43291 252 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 HPGDSO60760 199 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 HBZP02008 142 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 MELTFP08582 738 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms