RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 MOB3BQ86TA1 216 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 RDH10Q8IZV5 341 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 OR8H3Q8N146 312 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 PHYHIPQ92561 330 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 UBE2E2Q96LR5 201 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 MND1Q9BWT6 205 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 TMEM138Q9NPI0 162 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 MTCH1Q9NZJ7 389 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 CKLFQ9UBR5 152 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 BLOC1S6Q9UL45 172 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 TRBV5-5A0A0J9YX44 114 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 ERICH4A6NGS2 130 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 F8VVB4 439 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 F8VWA3 439 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 SIRPB1O00241 398 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 SH2D1BO14796 132 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 IGHV3-7P01780 117 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 CSN2P05814 226 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 CDK1P06493 297 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 GNAO1P09471 354 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 FSTP19883 344 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 KCNJ3P48549 501 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 ZP1P60852 638 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 PPP3R1P63098 170 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 PITPNAQ00169 270 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 AESQ08117 197 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 GPR176Q14439 515 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 TRAM1Q15629 374 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 ODF4Q2M2E3 257 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 Q499Y3 187 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 NHLRC3Q5JS37 347 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 ASCL4Q6XD76 172 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 SLC25A26Q70HW3 274 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 LINC00596Q86U02 117 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 FAM58AQ8N1B3 248 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 NANOGP1Q8N7R0 232 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 OR10X1Q8NGY0 326 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 TMEM106AQ96A25 262 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 MRPS24Q96EL2 167 aaKnown RBP8.59□□□□□ -1.03
VPS53-207ENST00000570510 RSRP1Q9BUV0 290 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 TMED9Q9BVK6 235 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 ELOVL1Q9BW60 279 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 YTHDF1Q9BYJ9 559 aaKnown RBP8.59□□□□□ -1.03
VPS53-207ENST00000570510 OR51J1Q9H342 316 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 Q9H521 79 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 DUSP21Q9H596 190 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 C19orf73Q9NVV2 129 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 IL36GQ9NZH8 169 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 AASSQ9UDR5 926 aa8.59□□□□□ -1.03
VPS53-207ENST00000570510 IGKV1-27A0A075B6S5 117 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 A0A1W2PPI3 338 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 A8MZ25 164 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 E9PI62 339 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 J3QR06 171 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 PRKACAP17612 351 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 PSMA1P25786 263 aaKnown RBP8.58□□□□□ -1.04
VPS53-207ENST00000570510 PSMB8P28062 276 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 SOX6P35712 828 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 GDNFP39905 211 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 GLIPR1P48060 266 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 AQP4P55087 323 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 SCN1BQ07699 218 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 KISS1Q15726 138 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 RBM48Q5RL73 367 aaKnown RBP8.58□□□□□ -1.04
VPS53-207ENST00000570510 LAIR2Q6ISS4 152 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 ANKRD13BQ86YJ7 626 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 BPIFB6Q8NFQ5 453 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 OR51A4Q8NGJ6 313 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 OR2T10Q8NGZ9 312 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 TSEN15Q8WW01 171 aaKnown RBP8.58□□□□□ -1.04
VPS53-207ENST00000570510 NRG4Q8WWG1 115 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 ARPC1AQ92747 370 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 CORO2AQ92828 525 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 GHSRQ92847 366 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 DLX4Q92988 240 aaPredicted RBP8.58□□□□□ -1.04
VPS53-207ENST00000570510 PGLYRP3Q96LB9 341 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 KCTD7Q96MP8 289 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 PDCD1LG2Q9BQ51 273 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 IFT22Q9H7X7 185 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 GNB4Q9HAV0 340 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 HMG20AQ9NP66 347 aa8.58□□□□□ -1.04
VPS53-207ENST00000570510 IGHV3-72A0A0B4J1Y9 119 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 ODAMA1E959 279 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 ZNF729A6NN14 1252 aaPredicted RBP8.57□□□□□ -1.04
VPS53-207ENST00000570510 ANKRD65E5RJM6 399 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 LINC01619G3V211 115 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 I3L521 148 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 HSPA12AO43301 675 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 GAPDHP04406 335 aaKnown RBP8.57□□□□□ -1.04
VPS53-207ENST00000570510 CALCBP10092 127 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 CNTFRP26992 372 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 VHLP40337 213 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 OR3A1P47881 315 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 GNG10P50151 68 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 SLURP1P55000 103 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 GNB1P62873 340 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 RUNX1Q01196 453 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 IL13RA2Q14627 380 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms