RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TXNL1O43396 289 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 IGHV3-7P01780 117 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 MAS1P04201 325 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 UBBP0CG47 229 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 TMEM11P17152 192 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 FUT3P21217 361 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 GNG10P50151 68 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 RAB12Q6IQ22 244 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 SLC25A48Q6ZT89 311 aaKnown RBP13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 TMEM104Q8NE00 496 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 NEK7Q8TDX7 302 aa13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 MBNL3Q9NUK0 354 aaKnown RBP13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 LSM2Q9Y333 95 aaKnown RBP13.55□□□□□ -0.24
MAP1LC3B-208ENST00000570189 PNMA8CA0A1B0GUJ8 204 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 A0A1W2PPK0 400 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 SPINT2O43291 252 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 IGHG2P01859 326 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 IL3RAP26951 378 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 LTC4SQ16873 150 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 SYT6Q5T7P8 510 aaPredicted RBP13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 SIGIRRQ6IA17 410 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 CHPT1Q8WUD6 406 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 RTN4IP1Q8WWV3 396 aaPredicted RBP13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 MYDGFQ969H8 173 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 CST11Q9H112 138 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 ETAA1Q9NY74 926 aa13.54□□□□□ -0.24
MAP1LC3B-208ENST00000570189 TCRBV4S1A1TA0A5B7 111 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 IGKV1D-33P01593 117 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 IGKV1-33P01594 117 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 CD1BP29016 333 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 SLC6A1P30531 599 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 GP2P55259 537 aaKnown RBP13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 SLC35A2P78381 396 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 LY6G6FQ5SQ64 297 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 C1orf100Q5SVJ3 147 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 TGIF2LXQ8IUE1 241 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 SELENOIQ9C0D9 397 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
MAP1LC3B-208ENST00000570189 A0A1W2PPE3 182 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PSMB11A5LHX3 300 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PDCD6O75340 191 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CRTAPO75718 401 aaPredicted RBP13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 HES1Q14469 280 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 IRF3Q14653 427 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SPHARQ15513 63 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ACSM3Q53FZ2 586 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OXLD1Q5BKU9 147 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 LRRTM1Q86UE6 522 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 COMMD1Q8N668 190 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR8H1Q8NGG4 311 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR2T10Q8NGZ9 312 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CCDC107Q8WV48 283 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 EAF1Q96JC9 268 aaPredicted RBP13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 BANF2Q9H503 90 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TRAPPC2LQ9UL33 140 aa13.52□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SH2D7A6NKC9 451 aaPredicted RBP13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 H0YHG0 523 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 DUS4LO95620 317 aaKnown RBP13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 HBZP02008 142 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 UCHL1P09936 223 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PF4V1P10720 104 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 HTD2P86397 168 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 C9orf152Q5JTZ5 239 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 GLT8D1Q68CQ7 371 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PHF21AQ96BD5 680 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 RCC1LQ96I51 464 aaKnown RBP13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 DUSP21Q9H596 190 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 NECAP2Q9NVZ3 263 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 NKX1-2Q9UD57 310 aaPredicted RBP13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ZNF580Q9UK33 172 aa13.51□□□□□ -0.25
MAP1LC3B-208ENST00000570189 RCC1P18754 421 aaPredicted RBP13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CD33P20138 364 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 VHLP40337 213 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ZNF134P52741 427 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 GABPB1Q06547 395 aaPredicted RBP13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CT45A1Q5HYN5 189 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SLC35E3Q7Z769 313 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 MOB3BQ86TA1 216 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR4K15Q8NH41 348 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CT45A3Q8NHU0 189 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 MRPL30Q8TCC3 161 aaKnown RBP13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TM2D1Q9BX74 207 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ABCG5Q9H222 651 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ISYNA1Q9NPH2 558 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PLSCR3Q9NRY6 295 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ZFP57Q9NU63 452 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 GNG12Q9UBI6 72 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 JPT1Q9UK76 154 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 LRRC42Q9Y546 428 aa13.5□□□□□ -0.25
MAP1LC3B-208ENST00000570189 IGHV3-43A0A0B4J1X8 118 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 A0A1W2PRX2 142 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SLC22A1O15245 554 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SLC31A2O15432 143 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 LANCL1O43813 399 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 MOSP00540 346 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 IGHV3-43DP0DP04 118 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms