RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 LCN2P80188 198 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 SSBP1Q04837 148 aaKnown RBP8.6□□□□□ -1.03
CDH3-210ENST00000569117 ZNF273Q14593 569 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 ZNF846Q147U1 533 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 HMGN3Q15651 99 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 TMEM249Q2WGJ8 235 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 PYDC2Q56P42 97 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 TMEM200BQ69YZ2 307 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 FAM185AQ8N0U4 392 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 KIR3DL3Q8N743 410 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 GDPD1Q8N9F7 314 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 OR13A1Q8NGR1 328 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 OR52I2Q8NH67 350 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 FCAMRQ8WWV6 532 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 TRIM63Q969Q1 353 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 LINC00574Q9H8X3 128 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 Q9N2K0 584 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 IFT46Q9NQC8 304 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 TAS2R3Q9NYW6 316 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 OPN4Q9UHM6 478 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 ITGB1BP2Q9UKP3 347 aa8.6□□□□□ -1.03
CDH3-210ENST00000569117 KIAA2026Q5HYC2 2103 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 KIR2DS1A0A191URI9 304 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 A0A1W2PPH5 198 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 A0A1W2PQ09 198 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 MEIS3P1A6NDR6 274 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 C12orf77C9JDV5 145 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 ORC5O43913 435 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 LIPFP07098 398 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 PPIAL4GP0DN37 164 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 CGB3P0DN86 165 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 CGB7P0DN87 165 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 IGHV4-31P0DP07 118 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 RCC1P18754 421 aaPredicted RBP8.59□□□□□ -1.03
CDH3-210ENST00000569117 CD40LGP29965 261 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 RCVRNP35243 200 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 KIR2DS4P43632 304 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 GZMKP49863 264 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 DLX6P56179 175 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 KIR2DS1Q14954 304 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 HOGA1Q86XE5 327 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 Q8N402 240 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 ZNF565Q8N9K5 539 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 LINC01356Q8N9X3 169 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 SETD6Q8TBK2 473 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 MRGPRDQ8TDS7 321 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 CCDC107Q8WV48 283 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 SNAPC3Q92966 411 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 ZNF714Q96N38 554 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 TSC22D3Q99576 134 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 SDHCQ99643 169 aaPredicted RBP8.59□□□□□ -1.03
CDH3-210ENST00000569117 GAL3ST2Q9H3Q3 398 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 ZNF286AQ9HBT8 521 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 CALYQ9NYX4 217 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 MTFP1Q9UDX5 166 aa8.59□□□□□ -1.03
CDH3-210ENST00000569117 ZNF230Q9UIE0 474 aaPredicted RBP8.59□□□□□ -1.03
CDH3-210ENST00000569117 ARHGAP32A7KAX9 2087 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 ZNF469Q96JG9 3925 aaPredicted RBP8.58□□□□□ -1.04
CDH3-210ENST00000569117 TRAV39A0A0B4J263 110 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 KBTBD11-OT1A0A1B0GTJ5 212 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 MEX3AA1L020 520 aaKnown RBP8.58□□□□□ -1.04
CDH3-210ENST00000569117 NPIPB11E5RHQ5 1161 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 C15orf65H3BRN8 121 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 DIRAS3O95661 229 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 ZNF728P0DKX0 622 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 CCL3L1P16619 93 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 GZMHP20718 246 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 SSTR5P35346 364 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 C17orf58Q2M2W7 97 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 RNASE12Q5GAN4 147 aaKnown RBP8.58□□□□□ -1.04
CDH3-210ENST00000569117 SPNS3Q6ZMD2 512 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 CIARTQ8N365 385 aaPredicted RBP8.58□□□□□ -1.04
CDH3-210ENST00000569117 GVQW1Q8N7I0 195 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 MAPK1IP1LQ8NDC0 245 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 BEST4Q8NFU0 473 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 MAFIPQ8WZ33 124 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 MSI2Q96DH6 328 aaKnown RBP8.58□□□□□ -1.04
CDH3-210ENST00000569117 CABLES2Q9BTV7 478 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 CCDC32Q9BV29 185 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 TAF9BQ9HBM6 251 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 LPAR2Q9HBW0 351 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 RAB9BQ9NP90 201 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 KCNIP1Q9NZI2 227 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 KLK11Q9UBX7 282 aa8.58□□□□□ -1.04
CDH3-210ENST00000569117 ZNF107Q9UII5 783 aaPredicted RBP8.58□□□□□ -1.04
CDH3-210ENST00000569117 TEX15Q9BXT5 2789 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 MED13LQ71F56 2210 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 IGKV1D-8A0A087WSZ0 117 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 C17orf98A8MV24 154 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 TRDCB7Z8K6 153 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 M0R1W7 72 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 F2RL2O00254 374 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 FABP7O15540 132 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 SPINT2O43291 252 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 RBBP9O75884 186 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 HBZP02008 142 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 CSF1P09603 554 aa8.57□□□□□ -1.04
CDH3-210ENST00000569117 GATA3P23771 443 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms