RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	IGKV1D-33	P01593	117 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	IGKV1-33	P01594	117 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	CTSE	P14091	401 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	GABRA1	P14867	456 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF3	P17036	446 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	GZMM	P51124	257 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	MP68	P56378	58 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	DHRS2	Q13268	280 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNHIT3	Q15649	155 aa	Predicted RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	TMEM241	Q24JQ0	296 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	PYDC2	Q56P42	97 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	AMMECR1L	Q6DCA0	310 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	DRAM2	Q6UX65	266 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	PLEKHG7	Q6ZR37	379 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	OLIG3	Q7RTU3	272 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	SLC13A5	Q86YT5	568 aa	Predicted RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	C10orf107	Q8IVU9	208 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	CD302	Q8IX05	232 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	IQCF2	Q8IXL9	164 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	BOD1L2	Q8IYS8	172 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	FAM9C	Q8IZT9	166 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	OR51H1	Q8NH63	302 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	OR5K1	Q8NHB7	308 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	C2orf15	Q8WU43	125 aa	Known RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	DNAJB3	Q8WWF6	145 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	MAL2	Q969L2	176 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	TAMM41	Q96BW9	452 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	GALM	Q96C23	342 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	FXYD5	Q96DB9	178 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	REEP6	Q96HR9	211 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	TMEM56	Q96MV1	263 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	PKMYT1	Q99640	499 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	GNB1L	Q9BYB4	327 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	NDEL1	Q9GZM8	345 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	CHST5	Q9GZS9	411 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	ALX4	Q9H161	411 aa	Predicted RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	SPANXB1	Q9NS25	103 aa	Predicted RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNHIT6	Q9NWK9	470 aa	Known RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	TMEM216	Q9P0N5	145 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	PSMD13	Q9UNM6	376 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	TP53TG1	Q9Y2A0	90 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF443	Q9Y2A4	671 aa	Predicted RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	C15orf41	Q9Y2V0	281 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	LINC00588	Q9Y4M8	146 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	MTCH2	Q9Y6C9	303 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	NACAD	O15069	1562 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	TRBV24-1	A0A075B6N3	115 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	FABP12	A6NFH5	140 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001		H3BMM0	161 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	SMLR1	H3BR10	107 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001		M0QYV0	167 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	OVOL1	O14753	267 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	RCVRN	P35243	200 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	CD79B	P40259	229 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	UBE2G2	P60604	165 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	SKP1	P63208	163 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	FMOD	Q06828	376 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	TBC1D28	Q2M2D7	210 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	HSP90B2P	Q58FF3	399 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	PDZD11	Q5EBL8	140 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	HENMT1	Q5T8I9	393 aa	Known RBP	0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	ELP2	Q6IA86	826 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	TTC33	Q6PID6	262 aa	Predicted RBP	0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	PAGE2	Q7Z2X7	111 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	FAM19A3	Q7Z5A8	133 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	BLID	Q8IZY5	108 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001		Q8NAQ8	132 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	ATP6V1C2	Q8NEY4	427 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	OR9I1	Q8NGQ6	314 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	CD200R1	Q8TD46	325 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	UBE2W	Q96B02	151 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	SMIM12	Q96EX1	92 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	TRIB3	Q96RU7	358 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	GPR22	Q99680	433 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	LLPH	Q9BRT6	129 aa	Known RBP	0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	ULBP1	Q9BZM6	244 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	SLC22A4	Q9H015	551 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	ABCG5	Q9H222	651 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	DUSP21	Q9H596	190 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF286A	Q9HBT8	521 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	DMAC2	Q9NW81	257 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	NAGK	Q9UJ70	344 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	RPUSD1	Q9UJJ7	312 aa	Known RBP	0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	ATP6V1D	Q9Y5K8	247 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	ICOS	Q9Y6W8	199 aa		0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	CHD2	O14647	1828 aa	Known RBP	0.91	□□□□□ -2.26
BBS4-215	ENST00000569001	CACNA1D	Q01668	2161 aa		0.9	□□□□□ -2.26
BBS4-215	ENST00000569001	IGKV1D-37	A0A075B6S9	117 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001		A0A0A6YYH2	397 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	C1orf232	A0A0U1RR37	186 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001		A6NJ64	397 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	ARGFX	A6NJG6	315 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	GGTLC3	B5MD39	225 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001		E7EQL1	145 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	CCRL2	O00421	344 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	PSCA	O43653	123 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	HPGDS	O60760	199 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	SH2D1A	O60880	128 aa		0.9	□□□□□ -2.27
BBS4-215	ENST00000569001	TRGV3	P03979	118 aa		0.9	□□□□□ -2.27

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