RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MPZL2O60487 215 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 HTR3BO95264 441 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 ZNF134P52741 427 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 SAXO1Q8IYX7 474 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 CCDC54Q8NEL0 328 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 APH1BQ8WW43 257 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 ARL11Q969Q4 196 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 ORAI1Q96D31 301 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 CITED4Q96RK1 184 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 DPCDQ9BVM2 203 aaPredicted RBP11.49□□□□□ -0.57
USB1-214ENST00000568848 EDA2RQ9HAV5 297 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 PARP11Q9NR21 331 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 KIAA1456Q9P272 454 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 ZNF107Q9UII5 783 aaPredicted RBP11.49□□□□□ -0.57
USB1-214ENST00000568848 FBXO7Q9Y3I1 522 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 FRAS1Q86XX4 4008 aa11.49□□□□□ -0.57
USB1-214ENST00000568848 TNCP24821 2201 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 IGHV4OR15-8A0A075B7B6 117 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 A0A087WW49 117 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 SNTNA6NMZ2 147 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 OVOL1O14753 267 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 RRP9O43818 475 aaKnown RBP11.48□□□□□ -0.57
USB1-214ENST00000568848 MOSP00540 346 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 MT-ND2P03891 347 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 ISG15P05161 165 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 SOX6P35712 828 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 VHLP40337 213 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 SOX2P48431 317 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 MTNR1BP49286 362 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 ZNF616Q08AN1 781 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 GALEQ14376 348 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 SMN1Q16637 294 aaKnown RBP11.48□□□□□ -0.57
USB1-214ENST00000568848 LRRC36Q1X8D7 754 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 FAM27D1Q5T7N8 215 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 FDX2Q6P4F2 183 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 PDCD1LG2Q9BQ51 273 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 ALG8Q9BVK2 526 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 BARHL1Q9BZE3 327 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 RETNQ9HD89 108 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 GFOD1Q9NXC2 390 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
USB1-214ENST00000568848 SULT1B1O43704 296 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 SOX15O60248 233 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 OR8U8P0C7N1 319 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 PPIFP30405 207 aaKnown RBP11.47□□□□□ -0.57
USB1-214ENST00000568848 NDPQ00604 133 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 ALKBH1Q13686 389 aaKnown RBP11.47□□□□□ -0.57
USB1-214ENST00000568848 PRR18Q8N4B5 295 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 OR52I1Q8NGK6 324 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 RGP1Q92546 391 aaPredicted RBP11.47□□□□□ -0.57
USB1-214ENST00000568848 Q96MT0 163 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 ZMAT4Q9H898 229 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 ERVK13-1Q9NX77 482 aa11.47□□□□□ -0.57
USB1-214ENST00000568848 SMPD3Q9NY59 655 aaPredicted RBP11.47□□□□□ -0.57
USB1-214ENST00000568848 MAGEA13PA6NCF6 341 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 ANKRD65E5RJM6 399 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 GEMIN2O14893 280 aaKnown RBP11.46□□□□□ -0.57
USB1-214ENST00000568848 WBP4O75554 376 aaKnown RBP11.46□□□□□ -0.57
USB1-214ENST00000568848 OR7C1O76099 320 aaPredicted RBP11.46□□□□□ -0.57
USB1-214ENST00000568848 FADS2O95864 444 aaKnown RBP11.46□□□□□ -0.57
USB1-214ENST00000568848 IGHV4-30-4P0DP06 118 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 CD1BP29016 333 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 BLVRBP30043 206 aaPredicted RBP11.46□□□□□ -0.57
USB1-214ENST00000568848 CCR9P51686 369 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 GNMTQ14749 295 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 ECSCRQ19T08 205 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 CT45A1Q5HYN5 189 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 ZNF555Q8NEP9 628 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 OR1L1Q8NH94 360 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 CT45A3Q8NHU0 189 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 GPER1Q99527 375 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 TM2D3Q9BRN9 247 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 GON7Q9BXV9 100 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 ING4Q9UNL4 249 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 VSIG4Q9Y279 399 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 A3GALT2U3KPV4 340 aa11.46□□□□□ -0.57
USB1-214ENST00000568848 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 IGF1P05019 195 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 RAB40BQ12829 278 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 IL13RA2Q14627 380 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 RSU1Q15404 277 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 MMDQ15546 238 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 ATAD3CQ5T2N8 411 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 ELP2Q6IA86 826 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 TMEM65Q6PI78 240 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 Q8N1Y9 231 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 SYS1Q8N2H4 156 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 OR4K15Q8NH41 348 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 TSEN15Q8WW01 171 aaKnown RBP11.45□□□□□ -0.58
USB1-214ENST00000568848 CYGBQ8WWM9 190 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 MRPL48Q96GC5 212 aaKnown RBP11.45□□□□□ -0.58
USB1-214ENST00000568848 UBE2E2Q96LR5 201 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 MRPS18AQ9NVS2 196 aaKnown RBP11.45□□□□□ -0.58
USB1-214ENST00000568848 ST3GAL6Q9Y274 331 aa11.45□□□□□ -0.58
USB1-214ENST00000568848 RPL36Q9Y3U8 105 aaKnown RBP11.45□□□□□ -0.58
USB1-214ENST00000568848 SIRT4Q9Y6E7 314 aaPredicted RBP11.45□□□□□ -0.58
USB1-214ENST00000568848 TMEM30CPA0ZSE6 113 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms