RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CITED4Q96RK1 184 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 ALG8Q9BVK2 526 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 METTL9Q9H1A3 318 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 GHITMQ9H3K2 345 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 ISYNA1Q9NPH2 558 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 TRAV39A0A0B4J263 110 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 SPINT2O43291 252 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 IGLV1-40P01703 118 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 F2RL1P55085 397 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 LPCAT4Q643R3 524 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 AMIGO2Q86SJ2 522 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 OR6Q1Q8NGQ2 317 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 OR52N1Q8NH53 320 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 S100A13Q99584 98 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 SPACA1Q9HBV2 294 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 OAZ3Q9UMX2 235 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 ORC6Q9Y5N6 252 aa12.24□□□□□ -0.45
HERPUD1-215ENST00000568676 DYNC2H1Q8NCM8 4307 aaKnown RBP12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 FAM90A10PA6NDY2 464 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 AIPO00170 330 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 LANCL1O43813 399 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 SAP30O75446 220 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 HLA-DRB1P01911 266 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 FRMD6-AS1P0C7T7 363 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 GBX2P52951 348 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 KIAA0141Q14154 515 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 MMDQ15546 238 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 C6orf183Q5T699 404 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 ASPHD1Q5U4P2 390 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 TRAT1Q6PIZ9 186 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF439Q8NDP4 499 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 OR10K1Q8NGX5 313 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 ERGIC3Q9Y282 383 aa12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 MRPS28Q9Y2Q9 187 aaKnown RBP12.23□□□□□ -0.45
HERPUD1-215ENST00000568676 RYR2Q92736 4967 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF736B4DX44 427 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 FADS2O95864 444 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 MT-ND4P03905 459 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 GP9P14770 177 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 VHLP40337 213 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 RAB9AP51151 201 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 LSAMPQ13449 338 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 GPR176Q14439 515 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 OR51A2Q8NGJ7 313 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 NEK7Q8TDX7 302 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 DCUN1D4Q92564 292 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 LGALS12Q96DT0 336 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 PDCD1LG2Q9BQ51 273 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 GMPPBQ9Y5P6 360 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 TENM2Q9NT68 2774 aa12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 HUWE1Q7Z6Z7 4374 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-215ENST00000568676 SORL1Q92673 2214 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 IGHV3-43A0A0B4J1X8 118 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 TRAV41A0A0B4J266 112 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 GEMIN2O14893 280 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 ARPC1BO15143 372 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 CA11O75493 328 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 CDRT1O95170 752 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 OR8U9P0C7N5 309 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 IGHV3-43DP0DP04 118 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 GTF2F2P13984 249 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 SPNP16150 400 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF93P35789 620 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 GNB1P62873 340 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 PPP3R1P63098 170 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 ATAD3CQ5T2N8 411 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 LHFPL3Q86UP9 236 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 TCTEX1D1Q8N7M0 179 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 GPR148Q8TDV2 347 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 CCDC107Q8WV48 283 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 ISOC1Q96CN7 298 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 TM2D3Q9BRN9 247 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 CST11Q9H112 138 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 KLK15Q9H2R5 256 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 ISG20L2Q9H9L3 353 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 TRAPPC2LQ9UL33 140 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 ING4Q9UNL4 249 aa12.21□□□□□ -0.45
HERPUD1-215ENST00000568676 DNAH7Q8WXX0 4024 aa12.21□□□□□ -0.46
HERPUD1-215ENST00000568676 LINC01619G3V211 115 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 LDLRAD4O15165 306 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 ATP6V0E1O15342 81 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 SLC2A2P11168 524 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 MYF6P23409 242 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 GABPB1Q06547 395 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 RAB40BQ12829 278 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 CCDC58Q4VC31 144 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 CT45A1Q5HYN5 189 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 ACSM6Q6P461 480 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 OVCH2Q7RTZ1 564 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 ZNF554Q86TJ5 538 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 CT45A3Q8NHU0 189 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 MRPS24Q96EL2 167 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 Q96MT0 163 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 ZNF251Q9BRH9 671 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms