RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 C17orf98A8MV24 154 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 TRDCB7Z8K6 153 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 NPIPB11E5RHQ5 1161 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 M0R1W7 72 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 GSTZ1O43708 216 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-212ENST00000568539 TGFAP01135 160 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 RBP4P02753 201 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-212ENST00000568539 HLA-DRB3P79483 266 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 PAX8Q06710 450 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 LSAMPQ13449 338 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 PYDC2Q56P42 97 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 RNASE12Q5GAN4 147 aaKnown RBP6.94□□□□□ -1.3
SF3B3-212ENST00000568539 CYB5R2Q6BCY4 276 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 TRAT1Q6PIZ9 186 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 BTNL3Q6UXE8 466 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 C5orf24Q7Z6I8 188 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 GLCCI1Q86VQ1 547 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 HOGA1Q86XE5 327 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 Q8N7P7 452 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 S100ZQ8WXG8 99 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 SNAPC3Q92966 411 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 ARL11Q969Q4 196 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 C18orf12Q96KH6 178 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 SDHCQ99643 169 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-212ENST00000568539 SIRPDQ9H106 197 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 GAL3ST2Q9H3Q3 398 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 HIF1ANQ9NWT6 349 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 KCNIP1Q9NZI2 227 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 ONECUT1Q9UBC0 465 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 KLK11Q9UBX7 282 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 MGAT4AQ9UM21 535 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 KPTNQ9Y664 436 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 USF3Q68DE3 2245 aa6.94□□□□□ -1.3
SF3B3-212ENST00000568539 IGKV1-6A0A0C4DH72 117 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 F2RL2O00254 374 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 FABP7O15540 132 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 SPINT2O43291 252 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 RBBP9O75884 186 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 MMP23AO75900 390 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 HBZP02008 142 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 FCER2P06734 321 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 SCTP09683 121 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 GSTT2P0CG29 244 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 GSTT2BP0CG30 244 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 MMP9P14780 707 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 NAT1P18440 290 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 OMGP23515 440 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 GATA3P23771 443 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 RCVRNP35243 200 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 GDNFP39905 211 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 KIR2DS4P43632 304 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 ERVFRD-1P60508 538 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 ACTBP60709 375 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 ARF6P62330 175 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 ACTG1P63261 375 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 KIR2DS1Q14954 304 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 PRAMEF5Q5TYX0 476 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 DCAF12L2Q5VW00 463 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 OR52W1Q6IF63 320 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 HEPN1Q6WQI6 88 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 C1orf122Q6ZSJ8 110 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 LYSMD2Q8IV50 215 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 Q8N402 240 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 PRR18Q8N4B5 295 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 GDPD1Q8N9F7 314 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 BEST4Q8NFU0 473 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 OR1L1Q8NH94 360 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 RFESDQ8TAC1 157 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 UBALD1Q8TB05 177 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 TRIM63Q969Q1 353 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 THAP7Q9BT49 309 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-212ENST00000568539 METTL8Q9H825 291 aaKnown RBP6.93□□□□□ -1.3
SF3B3-212ENST00000568539 ZNF286AQ9HBT8 521 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 IFT46Q9NQC8 304 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 IDI2-AS1Q9NZ38 188 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 MTFP1Q9UDX5 166 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 ANXA10Q9UJ72 324 aa6.93□□□□□ -1.3
SF3B3-212ENST00000568539 RBMX2Q9Y388 322 aaKnown RBP6.93□□□□□ -1.3
SF3B3-212ENST00000568539 hCG_1809904A0A1W2PP81 198 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 A0A1W2PPE2 198 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 A0A1W2PR64 198 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 A0A1W2PRV1 198 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 J3QLI3 93 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 LANCL1O43813 399 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 CD5LO43866 347 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 IGHV1-8P0DP01 117 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 CD99P14209 185 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 FOSL1P15407 271 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 PRTN3P24158 256 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 FPR2P25090 351 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 PPP5CP53041 499 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 LOXL3P58215 753 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 HTD2P86397 168 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 SSBP1Q04837 148 aaKnown RBP6.92□□□□□ -1.3
SF3B3-212ENST00000568539 ZNF846Q147U1 533 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 HERPUD1Q15011 391 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 BAK1Q16611 211 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 TMEM30BQ3MIR4 351 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms