RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 UFSP2Q9NUQ7 469 aa18.4■□□□□ 0.54
DENND4A-208ENST00000568515 LRFN1Q9P244 771 aa18.4■□□□□ 0.54
DENND4A-208ENST00000568515 MRPS17Q9Y2R5 130 aaKnown RBP18.4■□□□□ 0.54
DENND4A-208ENST00000568515 EPHA8P29322 1005 aaPredicted RBP18.4■□□□□ 0.54
DENND4A-208ENST00000568515 REPIN1Q9BWE0 567 aaKnown RBP18.4■□□□□ 0.54
DENND4A-208ENST00000568515 KLF7O75840 302 aaPredicted RBP18.39■□□□□ 0.54
DENND4A-208ENST00000568515 PSG2P11465 335 aa18.39■□□□□ 0.54
DENND4A-208ENST00000568515 PKIAP61925 76 aa18.39■□□□□ 0.54
DENND4A-208ENST00000568515 Q6ZRM9 215 aa18.39■□□□□ 0.54
DENND4A-208ENST00000568515 P2RX4Q99571 388 aa18.39■□□□□ 0.54
DENND4A-208ENST00000568515 SSX3Q99909 188 aa18.39■□□□□ 0.54
DENND4A-208ENST00000568515 CABLES2Q9BTV7 478 aa18.39■□□□□ 0.54
DENND4A-208ENST00000568515 TRAPPC2LH3BP13 241 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 OPN1MWP04001 364 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 OPN1MW2P0DN77 364 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 OPN1MW3P0DN78 364 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 SSX7Q7RTT5 188 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 AGBL5Q8NDL9 886 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 PACRGQ96M98 296 aaPredicted RBP18.39■□□□□ 0.53
DENND4A-208ENST00000568515 RNF150Q9ULK6 438 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 OR2W1Q9Y3N9 320 aa18.39■□□□□ 0.53
DENND4A-208ENST00000568515 CEACAM21Q3KPI0 293 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 ZNF324BQ6AW86 544 aaPredicted RBP18.38■□□□□ 0.53
DENND4A-208ENST00000568515 SLC23A3Q6PIS1 610 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 C20orf204Q6ZNR8 217 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 RNASE11Q8TAA1 199 aaKnown RBP18.38■□□□□ 0.53
DENND4A-208ENST00000568515 MRPL30Q8TCC3 161 aaKnown RBP18.38■□□□□ 0.53
DENND4A-208ENST00000568515 ADGRG7Q96K78 797 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 HIST1H2BLQ99880 126 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 PSMG3Q9BT73 122 aaPredicted RBP18.38■□□□□ 0.53
DENND4A-208ENST00000568515 OR14J1Q9UGF5 321 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 ZNHIT1O43257 154 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 IGHV3-9P01782 118 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 CCNOP22674 350 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 ARL16Q0P5N6 197 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 ZNF880Q6PDB4 577 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 MKXQ8IYA7 352 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 ZNF525Q8N782 197 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 SNX22Q96L94 193 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 PHF7Q9BWX1 381 aaPredicted RBP18.38■□□□□ 0.53
DENND4A-208ENST00000568515 VAX2Q9UIW0 290 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 PITPNC1Q9UKF7 332 aa18.38■□□□□ 0.53
DENND4A-208ENST00000568515 PIGBOS1A0A0B4J2F0 54 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 METTL15P1P0C7V9 234 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 ZDHHC23Q8IYP9 409 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 CTDSP1Q9GZU7 261 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 RIMS4Q9H426 269 aaPredicted RBP18.37■□□□□ 0.53
DENND4A-208ENST00000568515 NCKAP5O14513 1909 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 RFPL3SP0C7P2 107 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 IAPPP10997 89 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 DDTP30046 118 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 IL11RAQ14626 422 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 REC114Q7Z4M0 266 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 C17orf78Q8N4C9 275 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 OR10J5Q8NHC4 309 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 ABHD3Q8WU67 409 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 CLDN23Q96B33 292 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 SGCZQ96LD1 299 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 CDH20Q9HBT6 801 aa18.37■□□□□ 0.53
DENND4A-208ENST00000568515 ERRFI1Q9UJM3 462 aaPredicted RBP18.37■□□□□ 0.53
DENND4A-208ENST00000568515 CEBPZOSA8MTT3 80 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 SYNGR2O43760 224 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 P04436 131 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 MRGPRGQ86SM5 289 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 PRO1933Q9H354 126 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 PSENENQ9NZ42 101 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 CACNG5Q9UF02 275 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 ZNF407Q9C0G0 2248 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 SMCO3A2RU48 225 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 MDKP21741 143 aaPredicted RBP18.36■□□□□ 0.53
DENND4A-208ENST00000568515 MDH2P40926 338 aaKnown RBP18.36■□□□□ 0.53
DENND4A-208ENST00000568515 SSTP61278 116 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 ACSF3Q4G176 576 aaPredicted RBP18.36■□□□□ 0.53
DENND4A-208ENST00000568515 GTF3AQ92664 365 aaKnown RBP18.36■□□□□ 0.53
DENND4A-208ENST00000568515 TSTD3H0UI37 97 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 IL2RGP31785 369 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 SERF2P84101 59 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 LRRC75BQ2VPJ9 315 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 WIPI1Q5MNZ9 446 aaPredicted RBP18.36■□□□□ 0.53
DENND4A-208ENST00000568515 MRPL21Q7Z2W9 205 aaKnown RBP18.36■□□□□ 0.53
DENND4A-208ENST00000568515 SPEM1Q8N4L4 309 aa18.36■□□□□ 0.53
DENND4A-208ENST00000568515 C9J4A7 227 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 SYNGR1O43759 233 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 TRAPPC6AO75865 159 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 IGKV1-39P01597 117 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 IGKV1D-39P04432 117 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 SSX9Q7RTT3 188 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 HAPLN4Q86UW8 402 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 OR10A7Q8NGE5 316 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 PI4KAP42356 2102 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 HS3ST1O14792 307 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 CYTIPO60759 359 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 IFNA10P01566 189 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 CCL2P13500 99 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 CLN3Q13286 438 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 WDR25Q64LD2 544 aaPredicted RBP18.35■□□□□ 0.53
DENND4A-208ENST00000568515 OR4X1Q8NH49 305 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 SAP25Q8TEE9 199 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 PSMF1Q92530 271 aa18.35■□□□□ 0.53
DENND4A-208ENST00000568515 LSM10Q969L4 123 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms