RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 EMX1Q04741 257 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 INCA1Q0VD86 236 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 KCTD19Q17RG1 926 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ACSM3Q53FZ2 586 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 CARD16Q5EG05 197 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM69Q5SWH9 247 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 COL5A1-AS1Q5SY13 56 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 SAMD13Q5VXD3 122 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 FBXW9Q5XUX1 488 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TMPRSS11AQ6ZMR5 421 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TCF24Q7RTU0 167 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 SLC36A1Q7Z2H8 476 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 SCD5Q86SK9 330 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 WDFY1Q8IWB7 410 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 PDZD9Q8IXQ8 264 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 LRRC18Q8N456 261 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 FTMTQ8N4E7 242 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM251Q8N6I4 163 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 FAM86B1Q8N7N1 296 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF738Q8NE65 137 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TSTD1Q8NFU3 115 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 NPBQ8NG41 125 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 OR6N2Q8NGY6 317 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ZFP90Q8TF47 636 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 CACNG8Q8WXS5 425 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 FGF11Q92914 225 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 EMG1Q92979 244 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM159Q96B96 161 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ROPN1LQ96C74 230 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 JSRP1Q96MG2 331 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ERMAPQ96PL5 475 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 RNF157Q96PX1 679 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 NPY6RQ99463 290 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 S100A13Q99584 98 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 SULT4A1Q9BR01 284 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM109Q9BVC6 243 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 UGT2B28Q9BY64 529 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ULBP2Q9BZM5 246 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 NKX6-2Q9C056 277 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 RPF2Q9H7B2 306 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 LYRM4Q9HD34 91 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 OR12D3Q9UGF7 316 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 PRPF19Q9UMS4 504 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 SNX12Q9UMY4 172 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ZFP30Q9Y2G7 519 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 POLDIP2Q9Y2S7 368 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 MTCH2Q9Y6C9 303 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 KIAA1671Q9BY89 1806 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ABCB11O95342 1321 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ARHGAP21Q5T5U3 1957 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 DOCK6Q96HP0 2047 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 COL6A6A6NMZ7 2263 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ZZEF1O43149 2961 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 PTPN13Q12923 2485 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF462Q96JM2 2506 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 MYH6P13533 1939 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 MTCL1Q9Y4B5 1905 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 IGLV3-16A0A075B6K0 115 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TRAV26-1A0A087WT03 109 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 A0A096LPI6 279 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 A0A1B0GVI7 797 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 NKX2-6A6NCS4 301 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 OR6C6A6NF89 314 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 SLC22A20A6NK97 555 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 OR2AG2A6NM03 316 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 HIDE1A8MVS5 230 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 IDSB3KWA1 339 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 F6UZH7 168 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 H0Y980 276 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 SMLR1H3BR10 107 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 H7C417 338 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 FOXE1O00358 373 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CXCR6O00574 342 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RFXANKO14593 260 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RAD51CO43502 376 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RCBTB2O95199 551 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 GADD45GO95257 159 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CLDN9O95484 217 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TCRBP04435 133 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TYMSP04818 313 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ISG15P05161 165 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 OR8U9P0C7N5 309 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RD3LP0DJH9 198 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CRISP2P16562 243 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TUBG1P23258 451 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 KDELR1P24390 212 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CMPK1P30085 196 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 IFNGR2P38484 337 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 PI4KAP42356 2102 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RBM34P42696 430 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 UQCRFS1P47985 274 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CSNK1A1P48729 337 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 DNASE1L1P49184 302 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 SLC18A1P54219 525 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 LINC00315P59091 139 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 DNAJB13P59910 316 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RAB8AP61006 207 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 NCS1P62166 190 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 MYL5Q02045 173 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms