RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ERVS71-1P61550 626 aa19.78■□□□□ 0.76
LINC00543-201ENST00000567234 TMEM268Q5VZI3 342 aa19.78■□□□□ 0.76
LINC00543-201ENST00000567234 ZNF324BQ6AW86 544 aaPredicted RBP19.78■□□□□ 0.76
LINC00543-201ENST00000567234 BATF2Q8N1L9 274 aa19.78■□□□□ 0.76
LINC00543-201ENST00000567234 FAM57AQ8TBR7 257 aa19.78■□□□□ 0.76
LINC00543-201ENST00000567234 TAF9BQ9HBM6 251 aa19.78■□□□□ 0.76
LINC00543-201ENST00000567234 A0A1B0GW64 132 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 H0YIZ8 118 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 UCNP55089 124 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 UCP3P55916 312 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 IL15RAQ13261 267 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 Q3ZCU0 254 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 Q6ZPA2 131 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 TOLLIPQ9H0E2 274 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 Q9N2K0 584 aa19.77■□□□□ 0.76
LINC00543-201ENST00000567234 FAM87AP0C7U9 286 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 LPAR6P43657 344 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 SLC9A3R2Q15599 337 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 LIME1Q9H400 295 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 RPS10P5Q9NQ39 176 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 SLC25A15Q9Y619 301 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 DSPP15924 2871 aaKnown RBP19.76■□□□□ 0.75
LINC00543-201ENST00000567234 TRBV6-6A0A0A6YYG2 114 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 C13orf42A0A1B0GVH6 325 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 WDR86Q86TI4 376 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 SGPP2Q8IWX5 399 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 SFXN3Q9BWM7 321 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 UFSP2Q9NUQ7 469 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 IL36RNQ9UBH0 155 aa19.76■□□□□ 0.75
LINC00543-201ENST00000567234 SHANK1Q9Y566 2161 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 C7orf77A4D0Y5 90 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 CRYM-AS1A6NIL9 109 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 PPIHO43447 177 aaKnown RBP19.75■□□□□ 0.75
LINC00543-201ENST00000567234 IFNA2P01563 188 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 ZNF728P0DKX0 622 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 KITLGP21583 273 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 FCGR2CP31995 323 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 CEACAM8P31997 349 aaPredicted RBP19.75■□□□□ 0.75
LINC00543-201ENST00000567234 CD80P33681 288 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 ERVK11-1P61568 191 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 RBM39Q14498 530 aaKnown RBP19.75■□□□□ 0.75
LINC00543-201ENST00000567234 ANKRD55Q3KP44 614 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 C3orf36Q3SXR2 165 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 SCCPDHQ8NBX0 429 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 OR8G5Q8NG78 346 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 MOB3AQ96BX8 217 aa19.75■□□□□ 0.75
LINC00543-201ENST00000567234 IGHV1-18A0A0C4DH31 117 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.74■□□□□ 0.75
LINC00543-201ENST00000567234 RHBDL1O75783 438 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 KNG1P01042 644 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 MPV17P39210 176 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 OR8G1Q15617 311 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 OR2B11Q5JQS5 317 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 TIMM23BQ5SRD1 257 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 POC1AQ8NBT0 407 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 ZNF488Q96MN9 340 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 FAM212BQ9NTI7 297 aaPredicted RBP19.74■□□□□ 0.75
LINC00543-201ENST00000567234 HEATR1Q9H583 2144 aaKnown RBP19.74■□□□□ 0.75
LINC00543-201ENST00000567234 IGHV2OR16-5A0A0B4J2B6 119 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 KIR2DS1A0A191URI9 304 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 IFNA10P01566 189 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 HOXB5P09067 269 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 HOXA5P20719 270 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 KIR2DS4P43632 304 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 KIR2DS1Q14954 304 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 ALKBH6Q3KRA9 238 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 LBHQ53QV2 105 aaPredicted RBP19.74■□□□□ 0.75
LINC00543-201ENST00000567234 SUMF2Q8NBJ7 301 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 GGACTQ9BVM4 153 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 ARV1Q9H2C2 271 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 C1orf123Q9NWV4 160 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 TMED3Q9Y3Q3 217 aa19.74■□□□□ 0.75
LINC00543-201ENST00000567234 CTXN2P0C2S0 81 aa19.73■□□□□ 0.75
LINC00543-201ENST00000567234 RBMXP38159 391 aaKnown RBP19.73■□□□□ 0.75
LINC00543-201ENST00000567234 DEFA6Q01524 100 aa19.73■□□□□ 0.75
LINC00543-201ENST00000567234 ZNF154Q13106 437 aa19.73■□□□□ 0.75
LINC00543-201ENST00000567234 ZNF718Q3SXZ3 478 aa19.73■□□□□ 0.75
LINC00543-201ENST00000567234 AWAT1Q58HT5 328 aa19.73■□□□□ 0.75
LINC00543-201ENST00000567234 MBNL2Q5VZF2 373 aaKnown RBP19.73■□□□□ 0.75
LINC00543-201ENST00000567234 ZNF474Q6S9Z5 364 aaPredicted RBP19.73■□□□□ 0.75
LINC00543-201ENST00000567234 LFNGQ8NES3 379 aa19.73■□□□□ 0.75
LINC00543-201ENST00000567234 NEK7Q8TDX7 302 aa19.73■□□□□ 0.75
LINC00543-201ENST00000567234 PGA5P0DJD9 388 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 STX12Q86Y82 276 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 UBAC2Q8NBM4 344 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 KCNIP3Q9Y2W7 256 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 ATP23Q9Y6H3 246 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 TRAV24A0A0B4J272 114 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 ST8SIA5O15466 376 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 DUSP1P28562 367 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 CDX1P47902 265 aaPredicted RBP19.72■□□□□ 0.75
LINC00543-201ENST00000567234 PRR14LQ5THK1 2151 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 Q6P435 159 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 GALNT14Q96FL9 552 aa19.72■□□□□ 0.75
LINC00543-201ENST00000567234 STRAPQ9Y3F4 350 aaKnown RBP19.72■□□□□ 0.75
LINC00543-201ENST00000567234 TRDCB7Z8K6 153 aa19.71■□□□□ 0.75
LINC00543-201ENST00000567234 DEGS1O15121 323 aa19.71■□□□□ 0.75
LINC00543-201ENST00000567234 TXNL1O43396 289 aa19.71■□□□□ 0.75
LINC00543-201ENST00000567234 SEC11BP0C7V7 166 aa19.71■□□□□ 0.75
LINC00543-201ENST00000567234 MDH2P40926 338 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms