RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MRPS24Q96EL2 167 aaKnown RBP14.46□□□□□ -0.09
USB1-213ENST00000566292 DERL3Q96Q80 235 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 BANF2Q9H503 90 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 CNOT2Q9NZN8 540 aaKnown RBP14.46□□□□□ -0.09
USB1-213ENST00000566292 EFCAB10A6NFE3 127 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 MCRIP1C9JLW8 97 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 MPIG6BO95866 241 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 CAPGP40121 348 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 KRTAP10-11P60412 298 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 SYT6Q5T7P8 510 aaPredicted RBP14.45□□□□□ -0.1
USB1-213ENST00000566292 AWAT2Q6E213 333 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 RAB12Q6IQ22 244 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 OR2W3Q7Z3T1 314 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 CDH26Q8IXH8 852 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 GAPTQ8N292 157 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 STX19Q8N4C7 294 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 ZNF439Q8NDP4 499 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 TMEM104Q8NE00 496 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 OR4K15Q8NH41 348 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 FBLIM1Q8WUP2 373 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 RTN4IP1Q8WWV3 396 aaPredicted RBP14.45□□□□□ -0.1
USB1-213ENST00000566292 RBMXL1Q96E39 390 aaKnown RBP14.45□□□□□ -0.1
USB1-213ENST00000566292 SPACA1Q9HBV2 294 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 ETAA1Q9NY74 926 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 PSORS1C1Q9UIG5 152 aa14.45□□□□□ -0.1
USB1-213ENST00000566292 K7EIL1 84 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 CD1AP06126 327 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 CELP19835 753 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 VHLP40337 213 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 THBS3P49746 956 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 ZNF134P52741 427 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 WNT4P56705 351 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 Q3ZCU0 254 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 SIGIRRQ6IA17 410 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 SLC25A48Q6ZT89 311 aaKnown RBP14.44□□□□□ -0.1
USB1-213ENST00000566292 AHSA2Q719I0 299 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 TGIF2LXQ8IUE1 241 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 MRPL41Q8IXM3 137 aaKnown RBP14.44□□□□□ -0.1
USB1-213ENST00000566292 C8orf59Q8N0T1 100 aaPredicted RBP14.44□□□□□ -0.1
USB1-213ENST00000566292 STPG2Q8N412 459 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 Q8N9W7 124 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 TRAPPC2LQ9UL33 140 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 PEX16Q9Y5Y5 336 aa14.44□□□□□ -0.1
USB1-213ENST00000566292 NCBP2LA6PVI3 153 aaKnown RBP14.43□□□□□ -0.1
USB1-213ENST00000566292 ZNF736B4DX44 427 aaPredicted RBP14.43□□□□□ -0.1
USB1-213ENST00000566292 HBZP02008 142 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 MGMTP16455 207 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 RCC1P18754 421 aaPredicted RBP14.43□□□□□ -0.1
USB1-213ENST00000566292 IL3RAP26951 378 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 CD1BP29016 333 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 ZNF137PP52743 207 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 C8orf86Q6ZUL3 223 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 OR51D1Q8NGF3 324 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 OR10V1Q8NGI7 309 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 OR2T10Q8NGZ9 312 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 OR1L1Q8NH94 360 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 Q96M66 194 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 SELENOIQ9C0D9 397 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 ABCG5Q9H222 651 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 PLSCR3Q9NRY6 295 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 PLCXD1Q9NUJ7 323 aa14.43□□□□□ -0.1
USB1-213ENST00000566292 COL7A1Q02388 2944 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 FAM90A10PA6NDY2 464 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 FAM90A7PA6NKC0 464 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 FAM90A23PA8MXZ1 464 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 MYL12BO14950 172 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 SPINT2O43291 252 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 CRTAPO75718 401 aaPredicted RBP14.42□□□□□ -0.1
USB1-213ENST00000566292 SC5DO75845 299 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 DUS4LO95620 317 aaKnown RBP14.42□□□□□ -0.1
USB1-213ENST00000566292 HOXD3P31249 432 aaPredicted RBP14.42□□□□□ -0.1
USB1-213ENST00000566292 GPR12P47775 334 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 CT45A1Q5HYN5 189 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 C6orf183Q5T699 404 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 OGFRL1Q5TC84 451 aaPredicted RBP14.42□□□□□ -0.1
USB1-213ENST00000566292 FOXRED2Q8IWF2 684 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 PRR18Q8N4B5 295 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 NANOGP1Q8N7R0 232 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 BPIFB6Q8NFQ5 453 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 CT45A3Q8NHU0 189 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 ZFP57Q9NU63 452 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 LIN7CQ9NUP9 197 aaKnown RBP14.42□□□□□ -0.1
USB1-213ENST00000566292 FKBP14Q9NWM8 211 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 GNG12Q9UBI6 72 aa14.42□□□□□ -0.1
USB1-213ENST00000566292 WI2-2373I1.2A0A1W2PRP0 233 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 UBE2QL1A1L167 161 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 CASQ2O14958 399 aaPredicted RBP14.41□□□□□ -0.1
USB1-213ENST00000566292 MOSP00540 346 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 FUT3P21217 361 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 SLC35B1P78383 322 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 EGFEM1PQ0D2K5 195 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 INSL4Q14641 139 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 C5orf24Q7Z6I8 188 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 COMMD1Q8N668 190 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 NKAIN3Q8N8D7 197 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 KLHL30-AS1Q8NEE0 82 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 S1PR3Q99500 378 aa14.41□□□□□ -0.1
USB1-213ENST00000566292 NUDT19A8MXV4 375 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 AP4M1O00189 453 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 CA11O75493 328 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms