RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SERPINA2P20848 420 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 TAS2R31P59538 309 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 OR2F1Q13607 317 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 ARL6IP1Q15041 203 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 MPV17LQ2QL34 196 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 LIN54Q6MZP7 749 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 FIP1L1Q6UN15 594 aaKnown RBP10.48□□□□□ -0.73
SF3B3-206ENST00000565990 LINC00596Q86U02 117 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 CHST4Q8NCG5 386 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 OR51S1Q8NGJ8 323 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 GCDHQ92947 438 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-206ENST00000565990 RAB39BQ96DA2 213 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 NEIL1Q96FI4 390 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-206ENST00000565990 TMUB1Q9BVT8 246 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 TM2D1Q9BX74 207 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 SHARPINQ9H0F6 387 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 FAM234AQ9H0X4 552 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 CST11Q9H112 138 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 ANAPC10Q9UM13 185 aa10.48□□□□□ -0.73
SF3B3-206ENST00000565990 FLNAP21333 2647 aaKnown RBP10.48□□□□□ -0.73
SF3B3-206ENST00000565990 ABCA2Q9BZC7 2435 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 FAM157AC9JC47 383 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 H7C1Q1 480 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 K7N7A8 449 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 DEGS1O15121 323 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 GPR37O15354 613 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 TMPRSS2O15393 492 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 ADAM20O43506 726 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 HAND1O96004 215 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 TFF1P04155 84 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 CD3DP04234 171 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 RLN1P04808 185 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 GSTP1P09211 210 aaKnown RBP10.47□□□□□ -0.73
SF3B3-206ENST00000565990 OR4E1P0C645 316 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 ZNF735P0CB33 412 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 FOSL1P15407 271 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 NAT1P18440 290 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 DUSP1P28562 367 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 CBX5P45973 191 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 GABRA2P47869 451 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 EFNB2P52799 333 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 RBM11P57052 281 aaKnown RBP10.47□□□□□ -0.73
SF3B3-206ENST00000565990 IL13RA1P78552 427 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 PNLIPRP3Q17RR3 467 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 PIGYQ3MUY2 71 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 ZNF260Q3ZCT1 412 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 OR10K2Q6IF99 312 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 GSG1LQ6UXU4 331 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 C17orf107Q6ZR85 190 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 ZNRF1Q8ND25 227 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 OR5M8Q8NGP6 311 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 SNX22Q96L94 193 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 Q96M66 194 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 SCGB3A2Q96PL1 93 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 CHIAQ9BZP6 476 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 PPA2Q9H2U2 334 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 BANF2Q9H503 90 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 NARFLQ9H6Q4 476 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 BEX1Q9HBH7 125 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 METRNQ9UJH8 293 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 CREBBPQ92793 2442 aa10.47□□□□□ -0.73
SF3B3-206ENST00000565990 TRAV24A0A0B4J272 114 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 A0A0B4J2A0 478 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 MFSD2BA6NFX1 497 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 FOXI3A8MTJ6 420 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 KIAA1324LA8MWY0 1029 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 A8MXK9 166 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 DVL1O14640 695 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 GEMIN2O14893 280 aaKnown RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 NDUFB3O43676 98 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 PSPNO60542 156 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 CA11O75493 328 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 CRTAPO75718 401 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 OR2H2O95918 312 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 CFDP00746 253 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 HEXAP06865 529 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 RPS2P15880 293 aaKnown RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 ZFP36P26651 326 aaKnown RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 CEBPDP49716 269 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 COL10A1Q03692 680 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 C4orf46Q504U0 113 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 RNASE10Q5GAN6 216 aaKnown RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 WDR25Q64LD2 544 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 DUX4L9Q6RFH8 374 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 SLC25A42Q86VD7 318 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 BPIFB2Q8N4F0 458 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 FAM216BQ8N7L0 139 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 OR8B3Q8NGG8 313 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 OR8B2Q96RD0 313 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 SELENOIQ9C0D9 397 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 LPAR5Q9H1C0 372 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.46□□□□□ -0.73
SF3B3-206ENST00000565990 RDH8Q9NYR8 311 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 OR14J1Q9UGF5 321 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 SHPKQ9UHJ6 478 aa10.46□□□□□ -0.73
SF3B3-206ENST00000565990 HIVEP1P15822 2718 aa10.46□□□□□ -0.74
SF3B3-206ENST00000565990 PPIAL4CA0A0B4J2A2 164 aa10.45□□□□□ -0.74
SF3B3-206ENST00000565990 NKX6-3A6NJ46 265 aa10.45□□□□□ -0.74
SF3B3-206ENST00000565990 B4DSR2 109 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms