RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 G3V3Q6 166 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 J3QLI3 93 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 MPZL2O60487 215 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 RAB36O95755 333 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 PSMA1P25786 263 aaKnown RBP1.93□□□□□ -2.1
CHD9-215ENST00000565442 TMED1Q13445 227 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 PAFAH1B3Q15102 231 aaKnown RBP1.93□□□□□ -2.1
CHD9-215ENST00000565442 RBM48Q5RL73 367 aaKnown RBP1.93□□□□□ -2.1
CHD9-215ENST00000565442 EBLN2Q6P2I7 272 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 CFAP53Q96M91 514 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 C20orf166-AS1Q96NR2 134 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 ACBD6Q9BR61 282 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 SLC19A3Q9BZV2 496 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 MS4A12Q9NXJ0 267 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 OR51B4Q9Y5P0 310 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 PCNX2A6NKB5 2137 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 USP42Q9H9J4 1324 aaKnown RBP1.92□□□□□ -2.1
CHD9-215ENST00000565442 LTBP2Q14767 1821 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 TOR1AO14656 332 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 NPPAP01160 153 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 RD3LP0DJH9 198 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 SULT1A2P50226 295 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 GABARAPL2P60520 117 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 OR8G1Q15617 311 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 XKRXQ6PP77 449 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 OR8K1Q8NGG5 319 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 OR4P4Q8NGL7 312 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 OR5C1Q8NGR4 320 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 OR2V1Q8NHB1 315 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 SUN5Q8TC36 379 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 DYNC2LI1Q8TCX1 351 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 CCDC12Q8WUD4 166 aaPredicted RBP1.92□□□□□ -2.1
CHD9-215ENST00000565442 HBEGFQ99075 208 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 MED10Q9BTT4 135 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 OR52A5Q9H2C5 316 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 ASCL3Q9NQ33 180 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 VPREB3Q9UKI3 123 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 WASHC3Q9Y3C0 194 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 MMACHCQ9Y4U1 282 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 CEP170Q5SW79 1584 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 MROH2BQ7Z745 1585 aa1.92□□□□□ -2.1
CHD9-215ENST00000565442 PTPRKQ15262 1439 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 SMARCA4P51532 1647 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 DOCK6Q96HP0 2047 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 EIF4G1Q04637 1599 aaKnown RBP1.91□□□□□ -2.1
CHD9-215ENST00000565442 ERICH2A1L162 156 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 SMLR1H3BR10 107 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 TP53I11O14683 189 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 CYTH3O43739 400 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 KDELR2P33947 212 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
CHD9-215ENST00000565442 RAB8AP61006 207 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 PSG4Q00888 419 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 BSPH1Q075Z2 132 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 CENPWQ5EE01 88 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 HENMT1Q5T8I9 393 aaKnown RBP1.91□□□□□ -2.1
CHD9-215ENST00000565442 TTC33Q6PID6 262 aaPredicted RBP1.91□□□□□ -2.1
CHD9-215ENST00000565442 SPNS3Q6ZMD2 512 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 TCF24Q7RTU0 167 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 DOLPP1Q86YN1 238 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 ZBTB8OSQ8IWT0 167 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 BOD1L2Q8IYS8 172 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 C2orf73Q8N5S3 287 aaPredicted RBP1.91□□□□□ -2.1
CHD9-215ENST00000565442 ATP6V1C2Q8NEY4 427 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 PHOSPHO2Q8TCD6 241 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 PPWD1Q96BP3 646 aaKnown RBP1.91□□□□□ -2.1
CHD9-215ENST00000565442 GALMQ96C23 342 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 STACQ99469 402 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 EBNA1BP2Q99848 306 aaKnown RBP1.91□□□□□ -2.1
CHD9-215ENST00000565442 CHST5Q9GZS9 411 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 LRRC19Q9H756 370 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 TAS2R9Q9NYW1 312 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 CRB1P82279 1406 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 MAP3K19Q56UN5 1328 aa1.91□□□□□ -2.1
CHD9-215ENST00000565442 KIF21AQ7Z4S6 1674 aa1.9□□□□□ -2.1
CHD9-215ENST00000565442 LCTP09848 1927 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 IGSF23A1L1A6 192 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 TRPC5OSA6NMA1 111 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 IQCF5A8MTL0 148 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 A8MWP6 167 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 F5H5T6 163 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 PHYHO14832 338 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 NDUFS6O75380 124 aaKnown RBP1.9□□□□□ -2.11
CHD9-215ENST00000565442 CRTAPO75718 401 aaPredicted RBP1.9□□□□□ -2.11
CHD9-215ENST00000565442 ASS1P00966 412 aaKnown RBP1.9□□□□□ -2.11
CHD9-215ENST00000565442 CTSEP14091 401 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 PVALBP20472 110 aaPredicted RBP1.9□□□□□ -2.11
CHD9-215ENST00000565442 GZMHP20718 246 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 PMS2P3Q13401 168 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 ZNF181Q2M3W8 571 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 VN1R4Q7Z5H5 301 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 OR10P1Q8NGE3 313 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 BBS2Q9BXC9 721 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 C11orf49Q9H6J7 331 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 HSPE1-MOB4S4R3N1 261 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 SHANK3Q9BYB0 1731 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 CC2D2AQ9P2K1 1620 aa1.9□□□□□ -2.11
CHD9-215ENST00000565442 BAZ1AQ9NRL2 1556 aaPredicted RBP1.89□□□□□ -2.11
CHD9-215ENST00000565442 MYO16Q9Y6X6 1858 aa1.89□□□□□ -2.11
CHD9-215ENST00000565442 LOC102725191A0A1B0GVB3 256 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms