RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CEACAM3P40198 252 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 YPEL3P61236 119 aaPredicted RBP4.78□□□□□ -1.64
CHD9-210ENST00000564582 DCAF7P61962 342 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 Q0VG73 95 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 TMEM187Q14656 261 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 KIR2DS3Q14952 304 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PSG3Q16557 428 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 ODF4Q2M2E3 257 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 TCTN1Q2MV58 587 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PDZD11Q5EBL8 140 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PSMG4Q5JS54 123 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 AADACL3Q5VUY0 350 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SLC25A24Q6NUK1 477 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 WDR73Q6P4I2 378 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 CBLN3Q6UW01 205 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PLXDC2Q6UX71 529 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 ERN2Q76MJ5 926 aaKnown RBP4.78□□□□□ -1.64
CHD9-210ENST00000564582 TCF24Q7RTU0 167 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 C10orf53Q8N6V4 93 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 OR4N2Q8NGD1 307 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 OR51A4Q8NGJ6 313 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 OR5AR1Q8NGP9 310 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 CMTM2Q8TAZ6 248 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PP6455Q8WZ26 134 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SUSD6Q92537 303 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SMIM10Q96HG1 83 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 COX14Q96I36 57 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 C18orf12Q96KH6 178 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 TBX15Q96SF7 602 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SMIM7Q9BQ49 75 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 VPS25Q9BRG1 176 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 ATG101Q9BSB4 218 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 CSTL1Q9H114 145 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 LINC00597Q9H2U6 94 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SPANXA1Q9NS26 97 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 CBLN4Q9NTU7 201 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SOHLH2Q9NX45 425 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 MRPL27Q9P0M9 148 aaKnown RBP4.78□□□□□ -1.64
CHD9-210ENST00000564582 B3GAT1Q9P2W7 334 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 CLEC4EQ9ULY5 219 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SLC22A13Q9Y226 551 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 LAMTOR2Q9Y2Q5 125 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 MRPS28Q9Y2Q9 187 aaKnown RBP4.78□□□□□ -1.64
CHD9-210ENST00000564582 LIPGQ9Y5X9 500 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 HS3ST3B1Q9Y662 390 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SCN2AQ99250 2005 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PLXNA2O75051 1894 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 NUP210Q8TEM1 1887 aaPredicted RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 SAA2-SAA4A0A096LPE2 208 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 IGHV2OR16-5A0A0B4J2B6 119 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A18PA6NE21 464 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A16PA6NEW6 464 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A9PA6NNJ1 464 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A5PA8MXJ8 464 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 ZNF878C9JN71 531 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 PROB1E7EW31 1015 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 C17orf112F2Z3M2 114 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TNFSF14O43557 240 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TRAF3IP2O43734 574 aaPredicted RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 LCATP04180 440 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A15PP0C7V4 464 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A14PP0C7W9 464 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 GNB3P16520 340 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 VDAC1P21796 283 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 GLRA1P23415 457 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 FKBP1BP68106 108 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 MEF2BQ02080 365 aaPredicted RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 SRSF1Q07955 248 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHD9-210ENST00000564582 ZP4Q12836 540 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TGIF1Q15583 401 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TWIST1Q15672 202 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 PRSS8Q16651 343 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 PRICKLE4Q2TBC4 344 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 OR10J3Q5JRS4 329 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 GFI1BQ5VTD9 330 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 GLIPR1L1Q6UWM5 242 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 C12orf54Q6X4T0 127 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 MCEMP1Q8IX19 187 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 RFLNBQ8N5W9 214 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TMEM156Q8N614 296 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 SIGLECL1Q8N7X8 197 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 OR13G1Q8NGZ3 307 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 FAM216AQ8WUB2 273 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 RNF133Q8WVZ7 376 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 RTN4IP1Q8WWV3 396 aaPredicted RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 RERGQ96A58 199 aaPredicted RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 C8orf44Q96CB5 159 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TM4SF19Q96DZ7 209 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 SDSLQ96GA7 329 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TMEM56Q96MV1 263 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TXN2Q99757 166 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 RARRES2Q99969 163 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 LPAR5Q9H1C0 372 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 CALHM2Q9HA72 323 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 PHPT1Q9NRX4 125 aaPredicted RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 ANXA10Q9UJ72 324 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 ZNF391Q9UJN7 358 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 ZNF346Q9UL40 294 aaKnown RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 LAMP3Q9UQV4 416 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms